oriTDB
The information of the oriT region
oriTDB accession number 200013
Name oriT_ ICEKp1  experimental
Sequence Completeness intact
oriT length 250 nt
oriT sequence GCACACCGTCGCAGCCAGGCTATATTTCCCGCCCCGGCGGGGAATATGCCGATTAGGCGC GACCAACCCCTTTAAAGCAGCGTTCCCATTTTTTCGAGCTTGCGAAGAAAAAATAGGCTA AACGCGCGTCTTAAAGGGGTTGGTCGCGCGTAGCGGACGACGGTGTGCCGCCTTTGACCC TGGGGGTTTTGGCGTGGCGTCCAGCCGCGACATTACCCCCATGCACCGGGCAATAAGGGC GTCCAGCCCG
IR (inverted repeat)[1-11] [158-168] nt  (GCACACCGTCG.. CGACGGTGTGC)
[57-75] [131-149] nt  (GCGCGACCAACCCCTTTAA..TTAAAGGGGTTGGTCGCGC)
Location of nic site [142-143] nt
Conserved sequence flanking the
  nic site
GGTTG|GTCGCG
Note _
L:1-11;R:158-168;L:57-75;R:131-149;D:142-143
Visualization of oriT structure (The oriT was characterized experimentally)
Reference
[1] Lin TL et al (2008) Characterization of integrative and conjugative element ICEKp1-associated genomic heterogeneity in a Klebsiella pneumoniae strain isolated from a primary liver abscess. J Bacteriol. 190(2):515-26. [PMID:17981959]
 N/A
 N/A
Information of mobile element
ID 18
Element type high-pathogenicity island
ICE description ICEKp1
ICEberg accesion number 126
GenBank accession number AB298504.1
Family ICEKp1
Genome size 75935 bp
Coordinate of oriT  [+/-] 66386..66635 [+]
Drug resistance _
Heavy-metal resistance _
Virulence factor insolico high-pathogenicity island
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 [484021]
Reference
[1] Lin TL et al (2008) Characterization of integrative and conjugative element ICEKp1-associated genomic heterogeneity in a Klebsiella pneumoniae strain isolated from a primary liver abscess. J Bacteriol. 190(2):515-26. [PMID:17981959]