1.001.001.001.001.001.001.001.000.781.001.001.001.000.991.001.001.001.001.001.001.001.001.000.991.00NC_000962-2970551..2980818NC_000962:1-20268NP_217157.1NP_217158.1NP_217159.1NP_217160.1NP_217161.1NP_217162.1NP_217163.2NP_217166.1NP_217167.1NP_217168.1NP_217169.1NP_217170.1NP_217171.1NP_217172.1NP_217173.1NP_217174.1NP_217175.1NP_217176.1NP_217177.1NP_217178.1NP_217179.1NP_217180.1NP_217181.1YP_177897.1NP_217184.1NP_217185.1NZ_CP125620-2955347..2964256NZ_CP125620:1-18910WP_003413675.1WP_003899407.1WP_003413686.1WP_003912823.1Protein_2748WP_003899409.1WP_003900538.1WP_003900539.1WP_003908028.1WP_003899411.1WP_003899412.1WP_003900541.1WP_003899414.1WP_003899415.1WP_003899416.1WP_003899417.1WP_014585547.1WP_003900543.1WP_003899420.1WP_003899421.1WP_003899422.1WP_003900544.1WP_003413717.1WP_003413719.1WP_003899423.1Protein_2769WP_003413845.1WP_003899425.1WP_003413852.1ToxinAntitoxinIntegraseOthersIdentity (%)01002.5kb

Instructions:

  • Drag cluster names to re-order clusters
  • Hover over a locus to reveal box and handles; drag box to move the locus, drag handles to resize it, double click to flip
  • Click genes to anchor the figure around them
  • Right click genes to edit their labels
  • Click cluster names and legend entries to rename them
  • Click legend circles to change gene colours
  • Right click legend entries to remove them and hide links
  • Click scale bar text to change its length
  • Tweak other options below!

If you found clinker useful, please cite:

          clinker & clustermap.js: Automatic generation of gene cluster comparison figures
          Cameron L.M. Gilchrist, Yit-Heng Chooi
          Bioinformatics. doi: https://doi.org/10.1093/bioinformatics/btab007
        

Plot arrangement

Cluster settings

Gene arrows

Gene labels

Scale bar

Colour bar

Legend

Links