1.001.001.001.001.001.001.001.001.001.001.000.941.001.001.001.001.001.001.000.991.001.001.001.001.001.00NC_002695-1453354..1465636NC_002695:1-22283NP_309425.1NP_309426.1NP_309428.1NP_309429.1NP_309430.1NP_309431.1NP_309432.1NP_309433.1NP_309434.3NP_309435.1NP_309436.1NP_309437.2NP_309438.1NP_309439.1NP_309440.4NP_309441.1NP_309442.1NP_309443.1NP_309444.1NP_309446.1NP_309447.1NP_309448.1NP_309449.1NP_309450.1NP_309451.3NP_309452.1NP_309453.2NZ_CP038292-3299451..3310284NZ_CP038292:1-20834WP_001070358.1WP_010917790.1WP_000857405.1WP_000489578.1WP_000992818.1WP_000771428.1WP_000791650.1WP_000481500.1WP_000833288.1WP_001264088.1WP_001189321.1WP_001301587.1WP_001001917.1WP_000283664.1WP_000351284.1WP_001280481.1WP_000839282.1WP_000976853.1WP_000854914.1WP_001416641.1WP_001220314.1WP_001186738.1WP_000214398.1WP_001234682.1WP_000102669.1WP_000203541.1ToxinAntitoxinVFOthersIdentity (%)01002.5kb

Instructions:

  • Drag cluster names to re-order clusters
  • Hover over a locus to reveal box and handles; drag box to move the locus, drag handles to resize it, double click to flip
  • Click genes to anchor the figure around them
  • Right click genes to edit their labels
  • Click cluster names and legend entries to rename them
  • Click legend circles to change gene colours
  • Right click legend entries to remove them and hide links
  • Click scale bar text to change its length
  • Tweak other options below!

If you found clinker useful, please cite:

          clinker & clustermap.js: Automatic generation of gene cluster comparison figures
          Cameron L.M. Gilchrist, Yit-Heng Chooi
          Bioinformatics. doi: https://doi.org/10.1093/bioinformatics/btab007
        

Plot arrangement

Cluster settings

Gene arrows

Gene labels

Scale bar

Colour bar

Legend

Links