1.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.001.000.940.520.550.471.000.941.000.500.550.460.520.501.000.610.500.550.550.611.000.490.470.460.500.491.001.001.001.001.001.000.310.311.001.001.000.321.001.000.321.001.000.320.320.321.000.421.001.000.570.571.000.320.421.001.001.001.001.001.000.99NC_002745-1850940..1883547NC_002745:1-42608WP_001822900.1WP_000672013.1WP_000718107.1WP_000778528.1WP_000348364.1WP_012840523.1WP_001795210.1WP_000070642.1WP_000669024.1WP_000627540.1WP_000414216.1Protein_1723WP_001801861.1WP_001792025.1Protein_1726Protein_1727WP_000072627.1WP_000028669.1WP_001791797.1WP_001038752.1WP_011447030.1WP_001038704.1WP_001038872.1WP_001039454.1WP_001039427.1WP_001092780.1Protein_1738WP_000550252.1WP_000543854.1WP_000782463.1WP_000473596.1Protein_1743WP_000206343.1WP_001253432.1WP_000617704.1WP_000848318.1WP_000736712.1WP_001236362.1Protein_1750WP_000713847.1WP_000821658.1WP_010922839.1WP_000132890.1WP_000167542.1WP_000162881.1WP_000233526.1WP_001790154.1WP_000737976.1NZ_CP018766-1967728..2000336NZ_CP018766:1-42609WP_001822900.1WP_000672013.1WP_000718107.1WP_000778528.1WP_000348364.1WP_012840523.1WP_001795210.1WP_000070642.1WP_000669024.1WP_000627540.1WP_000414216.1Protein_1882WP_001801861.1WP_001792025.1Protein_1885Protein_1886WP_000072627.1WP_000028669.1WP_001791797.1Protein_1890WP_011447030.1WP_001038704.1WP_001038872.1WP_001039454.1WP_001039427.1WP_001092780.1Protein_1897WP_000550252.1WP_000543854.1WP_000782463.1WP_000473596.1Protein_1902WP_000206343.1WP_001253432.1WP_000617704.1WP_000848318.1WP_000736712.1WP_001236362.1Protein_1909WP_000713847.1WP_000821658.1WP_010922839.1WP_000132890.1WP_000167542.1WP_000162881.1WP_000233526.1WP_001790154.1WP_000737975.1ToxinVFTransposaseOthersIdentity (%)01002.5kb

Instructions:

  • Drag cluster names to re-order clusters
  • Hover over a locus to reveal box and handles; drag box to move the locus, drag handles to resize it, double click to flip
  • Click genes to anchor the figure around them
  • Right click genes to edit their labels
  • Click cluster names and legend entries to rename them
  • Click legend circles to change gene colours
  • Right click legend entries to remove them and hide links
  • Click scale bar text to change its length
  • Tweak other options below!

If you found clinker useful, please cite:

          clinker & clustermap.js: Automatic generation of gene cluster comparison figures
          Cameron L.M. Gilchrist, Yit-Heng Chooi
          Bioinformatics. doi: https://doi.org/10.1093/bioinformatics/btab007
        

Plot arrangement

Cluster settings

Gene arrows

Gene labels

Scale bar

Colour bar

Legend

Links