Detailed information of TA system
Overview
TA module
| Type | VIII | Classification (family/domain) | SdsR-RyeA/- |
| Location | 4796125..4796163 | Replicon | chromosome |
| Accession | NZ_CP024885 | ||
| Organism | Klebsiella aerogenes strain AR_0009 | ||
Toxin (RNA)
| Gene name | SdsR | ||
| Locus tag | - | ||
| Coordinates | 4796133..4796163 (-) |
Antitoxin (RNA)
| Gene name | RyeA | ||
| Locus tag | - | ||
| Coordinates | 4796125..4796163 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM336_RS24020 | 4791427..4791945 | + | 519 | WP_015366014.1 | spore coat U domain-containing protein | - |
| AM336_RS24025 | 4791963..4792712 | + | 750 | WP_015366013.1 | molecular chaperone | - |
| AM336_RS24030 | 4792715..4795039 | + | 2325 | WP_032705949.1 | fimbrial biogenesis outer membrane usher protein | - |
| AM336_RS24035 | 4795058..4796005 | + | 948 | WP_032706245.1 | spore coat U domain-containing protein | - |
| - | 4796125..4796163 | + | 39 | - | - | Antitoxin |
| - | 4796133..4796163 | - | 31 | - | - | Toxin |
| AM336_RS24040 | 4796408..4797841 | - | 1434 | WP_032716195.1 | hypothetical protein | - |
| AM336_RS24045 | 4797841..4800108 | - | 2268 | WP_050595190.1 | right-handed parallel beta-helix repeat-containing protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | - | 4780856..4844066 | 63210 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
