Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | higBA (relBE)/RelE-MqsA |
| Location | 3270310..3270901 | Replicon | chromosome |
| Accession | NZ_CP020931 | ||
| Organism | Marinobacter salarius strain SMR5 | ||
Toxin (Protein)
| Gene name | higB | Uniprot ID | R8AZV1 |
| Locus tag | MARSALSMR5_RS15020 | Protein ID | WP_012137896.1 |
| Coordinates | 3270590..3270901 (-) | Length | 104 a.a. |
Antitoxin (Protein)
| Gene name | higA | Uniprot ID | - |
| Locus tag | MARSALSMR5_RS15015 | Protein ID | WP_012137897.1 |
| Coordinates | 3270310..3270597 (-) | Length | 96 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MARSALSMR5_RS14965 | 3265456..3265932 | - | 477 | WP_085681439.1 | DUF523 domain-containing protein | - |
| MARSALSMR5_RS14970 | 3265987..3266373 | - | 387 | WP_085681440.1 | hypothetical protein | - |
| MARSALSMR5_RS14975 | 3266546..3266881 | - | 336 | WP_075195937.1 | hypothetical protein | - |
| MARSALSMR5_RS14980 | 3266882..3267079 | - | 198 | WP_085681441.1 | tautomerase family protein | - |
| MARSALSMR5_RS14985 | 3267112..3267597 | - | 486 | WP_157665618.1 | GNAT family N-acetyltransferase | - |
| MARSALSMR5_RS14990 | 3267703..3267954 | - | 252 | WP_085682042.1 | HigA family addiction module antidote protein | - |
| MARSALSMR5_RS21540 | 3267959..3268171 | - | 213 | WP_127400810.1 | GNAT family N-acetyltransferase | - |
| MARSALSMR5_RS14995 | 3268152..3268571 | - | 420 | WP_085681443.1 | DoxX-like family protein | - |
| MARSALSMR5_RS15000 | 3268546..3268983 | - | 438 | WP_085681444.1 | thiol-disulfide oxidoreductase DCC family protein | - |
| MARSALSMR5_RS15005 | 3269126..3269527 | - | 402 | WP_075195941.1 | GFA family protein | - |
| MARSALSMR5_RS15010 | 3269589..3270215 | - | 627 | WP_075195942.1 | hypothetical protein | - |
| MARSALSMR5_RS15015 | 3270310..3270597 | - | 288 | WP_012137897.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin |
| MARSALSMR5_RS15020 | 3270590..3270901 | - | 312 | WP_012137896.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| MARSALSMR5_RS15025 | 3270966..3271556 | - | 591 | WP_085681445.1 | hypothetical protein | - |
| MARSALSMR5_RS15030 | 3271689..3272012 | - | 324 | WP_085681446.1 | hypothetical protein | - |
| MARSALSMR5_RS15035 | 3272016..3272429 | - | 414 | WP_085681447.1 | GNAT family N-acetyltransferase | - |
| MARSALSMR5_RS15045 | 3273062..3273571 | - | 510 | WP_157665619.1 | hypothetical protein | - |
| MARSALSMR5_RS15050 | 3273568..3273900 | - | 333 | WP_085681450.1 | hypothetical protein | - |
| MARSALSMR5_RS15055 | 3274233..3275018 | - | 786 | WP_085681451.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 104 a.a. Molecular weight: 11563.30 Da Isoelectric Point: 9.9940
>T75701 WP_012137896.1 NZ_CP020931:c3270901-3270590 [Marinobacter salarius]
MLFIETSTFTKLLPNYLTDEEYRGLQTYLLQKPDAGDLIKGSGGVRKVRWAPAGSGKSGGIRAIYYWKKSDHEIWMLTLY
SKSERASIPGHTLKQIAEAIKNG
MLFIETSTFTKLLPNYLTDEEYRGLQTYLLQKPDAGDLIKGSGGVRKVRWAPAGSGKSGGIRAIYYWKKSDHEIWMLTLY
SKSERASIPGHTLKQIAEAIKNG
Download Length: 312 bp
>T75701 NZ_CP020931:c3270901-3270590 [Marinobacter salarius]
ATGCTATTCATCGAAACCTCAACGTTCACCAAGCTATTGCCGAACTACCTCACGGACGAGGAATACCGTGGGCTTCAAAC
CTACCTTTTGCAGAAGCCGGATGCCGGGGATCTAATCAAAGGCTCGGGTGGCGTTCGTAAAGTTCGATGGGCACCAGCGG
GTTCGGGAAAGAGCGGTGGTATCAGAGCCATTTACTACTGGAAGAAGTCTGACCACGAGATATGGATGCTCACGCTGTAC
AGTAAATCAGAGCGCGCCAGCATTCCTGGCCATACGCTCAAGCAGATAGCGGAGGCGATCAAAAATGGGTGA
ATGCTATTCATCGAAACCTCAACGTTCACCAAGCTATTGCCGAACTACCTCACGGACGAGGAATACCGTGGGCTTCAAAC
CTACCTTTTGCAGAAGCCGGATGCCGGGGATCTAATCAAAGGCTCGGGTGGCGTTCGTAAAGTTCGATGGGCACCAGCGG
GTTCGGGAAAGAGCGGTGGTATCAGAGCCATTTACTACTGGAAGAAGTCTGACCACGAGATATGGATGCTCACGCTGTAC
AGTAAATCAGAGCGCGCCAGCATTCCTGGCCATACGCTCAAGCAGATAGCGGAGGCGATCAAAAATGGGTGA
Antitoxin
Download Length: 96 a.a. Molecular weight: 10638.28 Da Isoelectric Point: 10.0886
>AT75701 WP_012137897.1 NZ_CP020931:c3270597-3270310 [Marinobacter salarius]
MGDRNLGAEILDGINEIKQFKKGKLALRTHELSEPSPPKVIRLKLNMSQSAFAGLMGVSVRTLQDWEQGRREPQGPAVAL
LRIAEQHPEVFNQLH
MGDRNLGAEILDGINEIKQFKKGKLALRTHELSEPSPPKVIRLKLNMSQSAFAGLMGVSVRTLQDWEQGRREPQGPAVAL
LRIAEQHPEVFNQLH
Download Length: 288 bp
>AT75701 NZ_CP020931:c3270597-3270310 [Marinobacter salarius]
ATGGGTGACAGGAACCTTGGAGCAGAGATTCTTGACGGTATCAATGAAATCAAGCAATTCAAGAAGGGCAAATTGGCTCT
ACGAACACATGAGCTTTCTGAGCCCTCACCGCCCAAAGTGATTAGGCTGAAGTTGAATATGTCGCAATCAGCGTTTGCAG
GTCTAATGGGAGTGAGCGTGCGAACTCTTCAGGATTGGGAGCAAGGACGCAGGGAGCCACAAGGCCCAGCGGTTGCTCTT
TTGCGCATTGCTGAACAACACCCGGAAGTTTTTAATCAGCTTCACTGA
ATGGGTGACAGGAACCTTGGAGCAGAGATTCTTGACGGTATCAATGAAATCAAGCAATTCAAGAAGGGCAAATTGGCTCT
ACGAACACATGAGCTTTCTGAGCCCTCACCGCCCAAAGTGATTAGGCTGAAGTTGAATATGTCGCAATCAGCGTTTGCAG
GTCTAATGGGAGTGAGCGTGCGAACTCTTCAGGATTGGGAGCAAGGACGCAGGGAGCCACAAGGCCCAGCGGTTGCTCTT
TTGCGCATTGCTGAACAACACCCGGAAGTTTTTAATCAGCTTCACTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|