Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/Txe-YefM |
| Location | 3756239..3756768 | Replicon | chromosome |
| Accession | NZ_CP014566 | ||
| Organism | Mycobacterium tuberculosis variant bovis BCG str. Tokyo 172 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | G0TI95 |
| Locus tag | AZH48_RS17585 | Protein ID | WP_003417760.1 |
| Coordinates | 3756511..3756768 (+) | Length | 86 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | G0TI94 |
| Locus tag | AZH48_RS17580 | Protein ID | WP_003417757.1 |
| Coordinates | 3756239..3756514 (+) | Length | 92 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AZH48_RS17545 | 3751270..3752568 | - | 1299 | WP_011799343.1 | PPE family protein | - |
| AZH48_RS17550 | 3752812..3753606 | - | 795 | WP_003417738.1 | BBE domain-containing protein | - |
| AZH48_RS17555 | 3753688..3754059 | - | 372 | WP_003417739.1 | FAD-binding oxidoreductase | - |
| AZH48_RS22345 | 3753957..3754175 | - | 219 | WP_157132559.1 | hypothetical protein | - |
| AZH48_RS17560 | 3754202..3754462 | - | 261 | WP_003417741.1 | hypothetical protein | - |
| AZH48_RS17565 | 3754577..3754966 | + | 390 | WP_010950876.1 | DUF732 domain-containing protein | - |
| AZH48_RS17570 | 3754980..3755273 | - | 294 | WP_003417749.1 | DUF3017 domain-containing protein | - |
| AZH48_RS17575 | 3755270..3756115 | - | 846 | WP_010950877.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| AZH48_RS17580 | 3756239..3756514 | + | 276 | WP_003417757.1 | type II toxin-antitoxin system antitoxin RelJ | Antitoxin |
| AZH48_RS17585 | 3756511..3756768 | + | 258 | WP_003417760.1 | Txe/YoeB family addiction module toxin | Toxin |
| AZH48_RS17590 | 3756810..3758000 | + | 1191 | WP_003900033.1 | NADH:flavin oxidoreductase | - |
| AZH48_RS17595 | 3758117..3758485 | + | 369 | WP_003417765.1 | FHA domain-containing protein | - |
| AZH48_RS17600 | 3758482..3759033 | - | 552 | WP_003417767.1 | pentapeptide repeat protein MfpA | - |
| AZH48_RS17605 | 3759040..3759621 | - | 582 | WP_003417769.1 | ATP/GTP-binding protein | - |
| AZH48_RS17610 | 3759602..3759970 | - | 369 | WP_003417772.1 | DUF742 domain-containing protein | - |
| AZH48_RS17615 | 3759948..3760340 | - | 393 | WP_011799344.1 | roadblock/LC7 domain-containing protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 86 a.a. Molecular weight: 10070.30 Da Isoelectric Point: 6.4693
>T61496 WP_003417760.1 NZ_CP014566:3756511-3756768 [Mycobacterium tuberculosis variant bovis BCG str. Tokyo 172]
VRSVNFDPDAWEDFLFWLAADRKTARRITRLIGEIQRDPFSGIGKPEPLQGELSGYWSRRIDDEHRLVYRAGDDEVTMLK
ARYHY
VRSVNFDPDAWEDFLFWLAADRKTARRITRLIGEIQRDPFSGIGKPEPLQGELSGYWSRRIDDEHRLVYRAGDDEVTMLK
ARYHY
Download Length: 258 bp
>T61496 NZ_CP014566:3756511-3756768 [Mycobacterium tuberculosis variant bovis BCG str. Tokyo 172]
GTGAGAAGCGTCAACTTCGATCCCGATGCCTGGGAGGACTTCTTGTTCTGGCTGGCCGCTGATCGCAAAACGGCCCGTCG
GATCACCCGGTTGATCGGAGAAATTCAGCGTGATCCGTTCAGCGGGATCGGCAAACCCGAGCCGCTCCAAGGTGAGTTGT
CGGGATACTGGTCGCGCCGGATCGACGACGAACACCGGCTAGTGTATCGAGCGGGCGACGACGAAGTCACGATGCTGAAG
GCCCGATACCACTACTGA
GTGAGAAGCGTCAACTTCGATCCCGATGCCTGGGAGGACTTCTTGTTCTGGCTGGCCGCTGATCGCAAAACGGCCCGTCG
GATCACCCGGTTGATCGGAGAAATTCAGCGTGATCCGTTCAGCGGGATCGGCAAACCCGAGCCGCTCCAAGGTGAGTTGT
CGGGATACTGGTCGCGCCGGATCGACGACGAACACCGGCTAGTGTATCGAGCGGGCGACGACGAAGTCACGATGCTGAAG
GCCCGATACCACTACTGA
Antitoxin
Download Length: 92 a.a. Molecular weight: 10194.35 Da Isoelectric Point: 4.6652
>AT61496 WP_003417757.1 NZ_CP014566:3756239-3756514 [Mycobacterium tuberculosis variant bovis BCG str. Tokyo 172]
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARRLMEAVARDKAGHSAFTKSV
DELREMAGGEE
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARRLMEAVARDKAGHSAFTKSV
DELREMAGGEE
Download Length: 276 bp
>AT61496 NZ_CP014566:3756239-3756514 [Mycobacterium tuberculosis variant bovis BCG str. Tokyo 172]
ATGAGCATCAGTGCGAGCGAGGCGAGGCAGCGCCTGTTTCCACTCATCGAACAGGTCAATACCGATCACCAGCCGGTGCG
GATCACCTCCCGGGCCGGCGATGCGGTGCTGATGTCCGCCGACGACTACGACGCGTGGCAGGAAACGGTCTATCTGCTGC
GCTCACCGGAGAACGCCAGGCGGTTGATGGAAGCGGTTGCCCGGGATAAGGCTGGGCACTCGGCTTTCACCAAGTCTGTA
GATGAGCTGCGGGAGATGGCCGGCGGCGAGGAGTGA
ATGAGCATCAGTGCGAGCGAGGCGAGGCAGCGCCTGTTTCCACTCATCGAACAGGTCAATACCGATCACCAGCCGGTGCG
GATCACCTCCCGGGCCGGCGATGCGGTGCTGATGTCCGCCGACGACTACGACGCGTGGCAGGAAACGGTCTATCTGCTGC
GCTCACCGGAGAACGCCAGGCGGTTGATGGAAGCGGTTGCCCGGGATAAGGCTGGGCACTCGGCTTTCACCAAGTCTGTA
GATGAGCTGCGGGAGATGGCCGGCGGCGAGGAGTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|