Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | /RES-TIGR02293 |
| Location | 3169714..3170627 | Replicon | chromosome |
| Accession | NZ_CP009850 | ||
| Organism | UNVERIFIED_ORG: Enterobacter cloacae strain ECNIH4 | ||
Toxin (Protein)
| Gene name | - | Uniprot ID | A0A2J0PLX5 |
| Locus tag | ECNIH4_RS15125 | Protein ID | WP_023337016.1 |
| Coordinates | 3170154..3170627 (+) | Length | 158 a.a. |
Antitoxin (Protein)
| Gene name | - | Uniprot ID | A0A2J0PMR8 |
| Locus tag | ECNIH4_RS15120 | Protein ID | WP_023337017.1 |
| Coordinates | 3169714..3170157 (+) | Length | 148 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECNIH4_RS15105 (ECNIH4_15105) | 3165523..3167244 | + | 1722 | WP_014883200.1 | cysteine/glutathione ABC transporter ATP-binding protein/permease CydC | - |
| ECNIH4_RS15110 (ECNIH4_15110) | 3167290..3167994 | + | 705 | WP_023337019.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
| ECNIH4_RS15115 (ECNIH4_15115) | 3168279..3168497 | + | 219 | WP_002211347.1 | translation initiation factor IF-1 | - |
| ECNIH4_RS15120 (ECNIH4_15120) | 3169714..3170157 | + | 444 | WP_023337017.1 | DUF2384 domain-containing protein | Antitoxin |
| ECNIH4_RS15125 (ECNIH4_15125) | 3170154..3170627 | + | 474 | WP_023337016.1 | RES domain-containing protein | Toxin |
| ECNIH4_RS15130 (ECNIH4_15130) | 3170649..3171203 | - | 555 | WP_023337015.1 | type I-F CRISPR-associated endoribonuclease Cas6/Csy4 | - |
| ECNIH4_RS15135 (ECNIH4_15135) | 3171213..3172211 | - | 999 | WP_038421207.1 | type I-F CRISPR-associated protein Csy3 | - |
| ECNIH4_RS15140 (ECNIH4_15140) | 3172225..3173160 | - | 936 | WP_023337013.1 | type I-F CRISPR-associated protein Csy2 | - |
| ECNIH4_RS15145 (ECNIH4_15145) | 3173157..3174179 | - | 1023 | WP_225990831.1 | type I-F CRISPR-associated protein Csy1 | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 158 a.a. Molecular weight: 17570.82 Da Isoelectric Point: 5.0700
>T49985 WP_023337016.1 NZ_CP009850:3170154-3170627 [Enterobacter cloacae]
MIFYRLVTGRYASEAWSGSGANQYGGRWNHKGHPAVYVSTSISLASLEILVHVRKDTVLNQYQLFSIDIPDDQIDYLDKA
WLPEDWQENPAPVSTMDLGTGWLQANSALALILPSCIIPYENNAILNPLHPSFHTALNSVQQLPFNFDTRLAEKTAP
MIFYRLVTGRYASEAWSGSGANQYGGRWNHKGHPAVYVSTSISLASLEILVHVRKDTVLNQYQLFSIDIPDDQIDYLDKA
WLPEDWQENPAPVSTMDLGTGWLQANSALALILPSCIIPYENNAILNPLHPSFHTALNSVQQLPFNFDTRLAEKTAP
Download Length: 474 bp
>T49985 NZ_CP009850:3170154-3170627 [Enterobacter cloacae]
ATGATTTTTTATCGTCTGGTGACAGGGCGCTATGCCAGCGAAGCGTGGAGCGGAAGTGGTGCAAACCAGTATGGCGGGCG
GTGGAATCATAAAGGCCATCCAGCTGTGTATGTGTCCACCTCCATTTCACTGGCCTCACTGGAGATTTTGGTGCACGTTC
GAAAAGATACTGTACTGAATCAGTACCAGCTTTTCAGCATTGATATCCCGGATGACCAGATTGATTACCTGGATAAAGCG
TGGCTCCCCGAGGACTGGCAGGAAAATCCGGCCCCCGTATCAACGATGGATCTGGGAACCGGTTGGTTGCAGGCTAACAG
CGCCCTCGCACTCATCTTACCCTCCTGCATCATTCCTTATGAAAACAATGCCATCCTTAACCCCTTACATCCGTCCTTCC
ACACGGCGCTCAATTCAGTTCAGCAACTGCCCTTTAATTTTGATACCCGCCTGGCTGAAAAAACCGCACCCTGA
ATGATTTTTTATCGTCTGGTGACAGGGCGCTATGCCAGCGAAGCGTGGAGCGGAAGTGGTGCAAACCAGTATGGCGGGCG
GTGGAATCATAAAGGCCATCCAGCTGTGTATGTGTCCACCTCCATTTCACTGGCCTCACTGGAGATTTTGGTGCACGTTC
GAAAAGATACTGTACTGAATCAGTACCAGCTTTTCAGCATTGATATCCCGGATGACCAGATTGATTACCTGGATAAAGCG
TGGCTCCCCGAGGACTGGCAGGAAAATCCGGCCCCCGTATCAACGATGGATCTGGGAACCGGTTGGTTGCAGGCTAACAG
CGCCCTCGCACTCATCTTACCCTCCTGCATCATTCCTTATGAAAACAATGCCATCCTTAACCCCTTACATCCGTCCTTCC
ACACGGCGCTCAATTCAGTTCAGCAACTGCCCTTTAATTTTGATACCCGCCTGGCTGAAAAAACCGCACCCTGA
Antitoxin
Download Length: 148 a.a. Molecular weight: 16349.68 Da Isoelectric Point: 7.2062
>AT49985 WP_023337017.1 NZ_CP009850:3169714-3170157 [Enterobacter cloacae]
MRTWIPAQKPADNALWRYAGLPANRGMRLIEFLNQGLPVSVLDNIHEWTAMSKADILRVTGINERNVARRKSAGRTLTPD
ESERVARFVRVLDAAVDYFGSKEEAWNWLQAPVRGLGNVAPVDLIATETGALEVTDLIGRLEHGVFA
MRTWIPAQKPADNALWRYAGLPANRGMRLIEFLNQGLPVSVLDNIHEWTAMSKADILRVTGINERNVARRKSAGRTLTPD
ESERVARFVRVLDAAVDYFGSKEEAWNWLQAPVRGLGNVAPVDLIATETGALEVTDLIGRLEHGVFA
Download Length: 444 bp
>AT49985 NZ_CP009850:3169714-3170157 [Enterobacter cloacae]
ATGAGAACATGGATCCCCGCGCAGAAACCTGCTGATAACGCGCTTTGGCGGTACGCCGGTTTACCTGCAAACAGAGGTAT
GCGGCTGATTGAATTTCTCAATCAGGGATTACCCGTCAGCGTCCTCGACAATATCCATGAGTGGACGGCGATGTCGAAAG
CGGACATTTTGCGCGTCACCGGAATTAATGAACGTAACGTGGCCCGGCGCAAAAGCGCGGGACGGACGCTGACGCCGGAT
GAAAGCGAACGCGTGGCCCGTTTCGTTCGGGTGCTGGATGCTGCTGTCGACTATTTTGGCAGTAAAGAAGAGGCATGGAA
CTGGCTGCAGGCACCGGTGCGCGGGCTAGGGAATGTTGCCCCTGTCGACCTGATCGCGACCGAAACCGGTGCACTGGAAG
TCACCGACTTGATTGGTCGACTCGAACATGGTGTGTTCGCATGA
ATGAGAACATGGATCCCCGCGCAGAAACCTGCTGATAACGCGCTTTGGCGGTACGCCGGTTTACCTGCAAACAGAGGTAT
GCGGCTGATTGAATTTCTCAATCAGGGATTACCCGTCAGCGTCCTCGACAATATCCATGAGTGGACGGCGATGTCGAAAG
CGGACATTTTGCGCGTCACCGGAATTAATGAACGTAACGTGGCCCGGCGCAAAAGCGCGGGACGGACGCTGACGCCGGAT
GAAAGCGAACGCGTGGCCCGTTTCGTTCGGGTGCTGGATGCTGCTGTCGACTATTTTGGCAGTAAAGAAGAGGCATGGAA
CTGGCTGCAGGCACCGGTGCGCGGGCTAGGGAATGTTGCCCCTGTCGACCTGATCGCGACCGAAACCGGTGCACTGGAAG
TCACCGACTTGATTGGTCGACTCGAACATGGTGTGTTCGCATGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
Structures
Toxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A2J0PLX5 |
Antitoxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A2J0PMR8 |