Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) fst-RNAII/-
Location 305019..305214 Replicon chromosome
Accession NZ_AP027136
Organism Enterococcus faecalis strain JARB-HU0796

Toxin (Protein)


Gene name fst Uniprot ID -
Locus tag QUD94_RS01530 Protein ID WP_015543884.1
Coordinates 305119..305214 (-) Length 32 a.a.

Antitoxin (RNA)


Gene name RNAII
Locus tag -
Coordinates 305019..305084 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QUD94_RS01515 (300637) 300637..302379 + 1743 WP_010710825.1 PTS transporter subunit EIIC -
QUD94_RS01520 (302370) 302370..304403 + 2034 WP_078122716.1 PRD domain-containing protein -
QUD94_RS01525 (304414) 304414..304848 + 435 WP_002358391.1 PTS sugar transporter subunit IIA -
- (305019) 305019..305084 + 66 NuclAT_9 - Antitoxin
QUD94_RS01530 (305119) 305119..305214 - 96 WP_015543884.1 type I toxin-antitoxin system Fst family toxin Toxin
QUD94_RS01535 (305460) 305460..307232 + 1773 WP_010710824.1 PTS mannitol-specific transporter subunit IIBC -
QUD94_RS01540 (307247) 307247..307684 + 438 WP_002355279.1 PTS sugar transporter subunit IIA -
QUD94_RS01545 (307699) 307699..308853 + 1155 WP_002355280.1 mannitol-1-phosphate 5-dehydrogenase -
QUD94_RS01550 (308921) 308921..310036 - 1116 WP_010710823.1 FAD-dependent oxidoreductase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3659.47 Da        Isoelectric Point: 4.6275

>T43010 WP_015543884.1 NZ_AP027136:c305214-305119 [Enterococcus faecalis]
MYEIVTKILVPIFVGIVLKLVTIWLEKQNEE

Download         Length: 96 bp

>T43010 NZ_AP027136:c305214-305119 [Enterococcus faecalis]
ATGTACGAGATTGTCACAAAAATTCTTGTGCCGATTTTTGTCGGGATTGTCCTGAAACTTGTAACCATTTGGTTGGAAAA
ACAGAACGAGGAATAA

Antitoxin


Download         Length: 66 bp

>AT43010 NZ_AP027136:305019-305084 [Enterococcus faecalis]
CTTGTGACAAAGTCGTGCATGGATGCACTAAAAAGACACCCTATCAGTAGTAGGGTGTCTTTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References