Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RelE(toxin)
Location 1380140..1380623 Replicon chromosome
Accession NZ_AP024276
Organism Streptococcus parasuis strain SUT-286

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag L6410_RS06910 Protein ID WP_172016284.1
Coordinates 1380140..1380400 (-) Length 87 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag L6410_RS06915 Protein ID WP_024404858.1
Coordinates 1380402..1380623 (-) Length 74 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(4-86)

Antitoxin

Protein of unknown function DUF6290

(1-71)


Sequences

Toxin        


Download         Length: 87 a.a.        Molecular weight: 10340.91 Da        Isoelectric Point: 9.9167

>T38284 WP_172016284.1 NZ_AP024276:c1380400-1380140 [Streptococcus parasuis]
MYRLEYSKKAQKQIKKLDRQIQRLLFAWIDKHLEGTENPRANGKGLTGNHAHEWRYRIGDYRLICDIQDDKLVILALEFG
HRKDIY

Download         Length: 261 bp

>T38284 NZ_AP024276:c1380400-1380140 [Streptococcus parasuis]
ATGTATCGTTTAGAGTATTCTAAAAAGGCTCAAAAGCAAATTAAGAAATTAGATAGGCAAATTCAGAGGTTGCTATTTGC
TTGGATTGATAAGCACTTAGAAGGGACTGAAAATCCACGCGCCAATGGTAAAGGTTTGACAGGTAATCATGCTCACGAGT
GGCGTTATCGTATCGGAGATTACCGACTGATTTGCGATATTCAAGATGATAAGTTGGTTATTTTAGCACTTGAGTTTGGA
CATCGTAAAGATATCTATTGA

Antitoxin


Download         Length: 74 a.a.        Molecular weight: 8565.57 Da        Isoelectric Point: 4.6104

>AT38284 WP_024404858.1 NZ_AP024276:c1380623-1380402 [Streptococcus parasuis]
MSTVTIRLNQEEEVFFKSYAQLTGQSLSSLFKKALERDIEDEYDLKIYHQAYDEYKANPETISHADFKKELGL

Download         Length: 222 bp

>AT38284 NZ_AP024276:c1380623-1380402 [Streptococcus parasuis]
ATGAGTACAGTAACTATCAGATTAAATCAAGAAGAAGAGGTATTCTTTAAAAGCTATGCACAATTAACAGGTCAAAGTCT
TTCTAGCCTTTTTAAGAAAGCTTTGGAGCGTGATATTGAAGATGAGTATGATTTAAAAATCTATCATCAAGCTTATGATG
AGTACAAAGCAAATCCAGAAACAATTAGTCATGCTGATTTTAAGAAAGAGCTAGGATTATAG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References