Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | mosAT/AbiEii-AbiEi |
| Location | 5003303..5004984 | Replicon | chromosome |
| Accession | NZ_OW970444 | ||
| Organism | Klebsiella pneumoniae isolate 101 | ||
Toxin (Protein)
| Gene name | mosT | Uniprot ID | J2XCI1 |
| Locus tag | LQV08_RS24570 | Protein ID | WP_004146663.1 |
| Coordinates | 5003303..5004220 (-) | Length | 306 a.a. |
Antitoxin (Protein)
| Gene name | mosA | Uniprot ID | - |
| Locus tag | LQV08_RS24575 | Protein ID | WP_032418188.1 |
| Coordinates | 5004226..5004984 (-) | Length | 253 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQV08_RS24550 (4998609) | 4998609..5000129 | + | 1521 | WP_032418186.1 | sugar ABC transporter ATP-binding protein | - |
| LQV08_RS24555 (5000126) | 5000126..5001124 | + | 999 | WP_002885172.1 | ribose ABC transporter permease | - |
| LQV08_RS24560 (5001155) | 5001155..5002096 | + | 942 | WP_002885156.1 | ABC transporter substrate-binding protein | - |
| LQV08_RS24565 (5002171) | 5002171..5003178 | + | 1008 | WP_032418187.1 | carbohydrate kinase family protein | - |
| LQV08_RS24570 (5003303) | 5003303..5004220 | - | 918 | WP_004146663.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin |
| LQV08_RS24575 (5004226) | 5004226..5004984 | - | 759 | WP_032418188.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin |
| LQV08_RS24580 (5005070) | 5005070..5005798 | - | 729 | WP_004210017.1 | response regulator transcription factor | - |
| LQV08_RS24585 (5006071) | 5006071..5008218 | + | 2148 | WP_077598926.1 | formate dehydrogenase subunit alpha | - |
| LQV08_RS24590 (5008215) | 5008215..5008358 | - | 144 | WP_022631365.1 | hypothetical protein | - |
| LQV08_RS24595 (5008564) | 5008564..5009250 | + | 687 | WP_004151733.1 | tetratricopeptide repeat protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 306 a.a. Molecular weight: 34659.10 Da Isoelectric Point: 5.4707
>T296347 WP_004146663.1 NZ_OW970444:c5004220-5003303 [Klebsiella pneumoniae]
MDIQAPYYRQVALLMQVLPYVAVEREFALKGGTAINLFIRDFPRLSVDIDLAWVPLESRAIALPHIRDALARIAANLQQQ
AGMSAVLQANRSDEMRVIVTTDSAQIKIEVSPVARGTLYPPQEREVVGAVEDVFGYASLPVVSLPDLYGGKLCAALDRQH
PRDFYDVKLLLDAQELDRPIFNGFIAYLLSHNRPLAEVLNPRWKDIAEPFYREFSGMTFETIALEELTAVPNRMIAALKS
CFTQQDVDFLLSFKRGEPDWRLAPEMRIQDLPAVQWKLRNIHQMPAIKRAESLDKLEKVLAEWRS
MDIQAPYYRQVALLMQVLPYVAVEREFALKGGTAINLFIRDFPRLSVDIDLAWVPLESRAIALPHIRDALARIAANLQQQ
AGMSAVLQANRSDEMRVIVTTDSAQIKIEVSPVARGTLYPPQEREVVGAVEDVFGYASLPVVSLPDLYGGKLCAALDRQH
PRDFYDVKLLLDAQELDRPIFNGFIAYLLSHNRPLAEVLNPRWKDIAEPFYREFSGMTFETIALEELTAVPNRMIAALKS
CFTQQDVDFLLSFKRGEPDWRLAPEMRIQDLPAVQWKLRNIHQMPAIKRAESLDKLEKVLAEWRS
Download Length: 918 bp
Antitoxin
Download Length: 253 a.a. Molecular weight: 28620.99 Da Isoelectric Point: 10.0001
>AT296347 WP_032418188.1 NZ_OW970444:c5004984-5004226 [Klebsiella pneumoniae]
MATKLNWLLQNSAPGDVILQSWLSQHAISPSLAFKYAQSGWLKKRGNGVYARAGREPEWNDALACLQNQLAAPVYVAGLS
SLVWQGRSHYLQLKQNQCWLSVENKALLPKWFREFPGVEWIVISGKKLPVLDDRYRVTLDIKGKKLIGSAPELAAYELLS
AVPETLSFNHAAELFQGLVNLNPRKVEYLLSVSQSVQAKRLYLFFASFYEHGWLKRIDSQKIDLGAGKRQIVENGKFNAQ
YQITVPERFQKE
MATKLNWLLQNSAPGDVILQSWLSQHAISPSLAFKYAQSGWLKKRGNGVYARAGREPEWNDALACLQNQLAAPVYVAGLS
SLVWQGRSHYLQLKQNQCWLSVENKALLPKWFREFPGVEWIVISGKKLPVLDDRYRVTLDIKGKKLIGSAPELAAYELLS
AVPETLSFNHAAELFQGLVNLNPRKVEYLLSVSQSVQAKRLYLFFASFYEHGWLKRIDSQKIDLGAGKRQIVENGKFNAQ
YQITVPERFQKE
Download Length: 759 bp
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|