Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | mosAT/AbiEii-AbiEi |
| Location | 5026663..5028344 | Replicon | chromosome |
| Accession | NZ_OW970374 | ||
| Organism | Klebsiella pneumoniae isolate 101 | ||
Toxin (Protein)
| Gene name | mosT | Uniprot ID | J2XCI1 |
| Locus tag | LQV21_RS24675 | Protein ID | WP_004146663.1 |
| Coordinates | 5026663..5027580 (-) | Length | 306 a.a. |
Antitoxin (Protein)
| Gene name | mosA | Uniprot ID | - |
| Locus tag | LQV21_RS24680 | Protein ID | WP_032418188.1 |
| Coordinates | 5027586..5028344 (-) | Length | 253 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQV21_RS24655 (5021969) | 5021969..5023489 | + | 1521 | WP_032418186.1 | sugar ABC transporter ATP-binding protein | - |
| LQV21_RS24660 (5023486) | 5023486..5024484 | + | 999 | WP_002885172.1 | ribose ABC transporter permease | - |
| LQV21_RS24665 (5024515) | 5024515..5025456 | + | 942 | WP_002885156.1 | ABC transporter substrate-binding protein | - |
| LQV21_RS24670 (5025531) | 5025531..5026538 | + | 1008 | WP_032418187.1 | carbohydrate kinase family protein | - |
| LQV21_RS24675 (5026663) | 5026663..5027580 | - | 918 | WP_004146663.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin |
| LQV21_RS24680 (5027586) | 5027586..5028344 | - | 759 | WP_032418188.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin |
| LQV21_RS24685 (5028430) | 5028430..5029158 | - | 729 | WP_004210017.1 | response regulator transcription factor | - |
| LQV21_RS24690 (5029431) | 5029431..5031578 | + | 2148 | WP_077598926.1 | formate dehydrogenase subunit alpha | - |
| LQV21_RS24695 (5031575) | 5031575..5031718 | - | 144 | WP_022631365.1 | hypothetical protein | - |
| LQV21_RS24700 (5031924) | 5031924..5032610 | + | 687 | WP_004151733.1 | tetratricopeptide repeat protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 306 a.a. Molecular weight: 34659.10 Da Isoelectric Point: 5.4707
>T296283 WP_004146663.1 NZ_OW970374:c5027580-5026663 [Klebsiella pneumoniae]
MDIQAPYYRQVALLMQVLPYVAVEREFALKGGTAINLFIRDFPRLSVDIDLAWVPLESRAIALPHIRDALARIAANLQQQ
AGMSAVLQANRSDEMRVIVTTDSAQIKIEVSPVARGTLYPPQEREVVGAVEDVFGYASLPVVSLPDLYGGKLCAALDRQH
PRDFYDVKLLLDAQELDRPIFNGFIAYLLSHNRPLAEVLNPRWKDIAEPFYREFSGMTFETIALEELTAVPNRMIAALKS
CFTQQDVDFLLSFKRGEPDWRLAPEMRIQDLPAVQWKLRNIHQMPAIKRAESLDKLEKVLAEWRS
MDIQAPYYRQVALLMQVLPYVAVEREFALKGGTAINLFIRDFPRLSVDIDLAWVPLESRAIALPHIRDALARIAANLQQQ
AGMSAVLQANRSDEMRVIVTTDSAQIKIEVSPVARGTLYPPQEREVVGAVEDVFGYASLPVVSLPDLYGGKLCAALDRQH
PRDFYDVKLLLDAQELDRPIFNGFIAYLLSHNRPLAEVLNPRWKDIAEPFYREFSGMTFETIALEELTAVPNRMIAALKS
CFTQQDVDFLLSFKRGEPDWRLAPEMRIQDLPAVQWKLRNIHQMPAIKRAESLDKLEKVLAEWRS
Download Length: 918 bp
Antitoxin
Download Length: 253 a.a. Molecular weight: 28620.99 Da Isoelectric Point: 10.0001
>AT296283 WP_032418188.1 NZ_OW970374:c5028344-5027586 [Klebsiella pneumoniae]
MATKLNWLLQNSAPGDVILQSWLSQHAISPSLAFKYAQSGWLKKRGNGVYARAGREPEWNDALACLQNQLAAPVYVAGLS
SLVWQGRSHYLQLKQNQCWLSVENKALLPKWFREFPGVEWIVISGKKLPVLDDRYRVTLDIKGKKLIGSAPELAAYELLS
AVPETLSFNHAAELFQGLVNLNPRKVEYLLSVSQSVQAKRLYLFFASFYEHGWLKRIDSQKIDLGAGKRQIVENGKFNAQ
YQITVPERFQKE
MATKLNWLLQNSAPGDVILQSWLSQHAISPSLAFKYAQSGWLKKRGNGVYARAGREPEWNDALACLQNQLAAPVYVAGLS
SLVWQGRSHYLQLKQNQCWLSVENKALLPKWFREFPGVEWIVISGKKLPVLDDRYRVTLDIKGKKLIGSAPELAAYELLS
AVPETLSFNHAAELFQGLVNLNPRKVEYLLSVSQSVQAKRLYLFFASFYEHGWLKRIDSQKIDLGAGKRQIVENGKFNAQ
YQITVPERFQKE
Download Length: 759 bp
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|