Detailed information of TA system
Overview
TA module
| Type | I | Classification (family/domain) | TMCS/- |
| Location | 509486..510065 | Replicon | chromosome |
| Accession | NZ_LT992468 | ||
| Organism | Staphylococcus aureus isolate 12_LA_293 | ||
Toxin (Protein)
| Gene name | MW1434 | Uniprot ID | A0A4P7P609 |
| Locus tag | DXE47_RS02940 | Protein ID | WP_001025401.1 |
| Coordinates | 509820..510065 (-) | Length | 82 a.a. |
Antitoxin (RNA)
| Gene name | MW1433 | ||
| Locus tag | - | ||
| Coordinates | 509486..509851 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXE47_RS02900 | 506228..506782 | - | 555 | WP_000647288.1 | DUF2815 family protein | - |
| DXE47_RS02905 | 506809..507975 | - | 1167 | WP_031794951.1 | DUF2800 domain-containing protein | - |
| DXE47_RS02910 | 507972..508334 | - | 363 | WP_000985976.1 | hypothetical protein | - |
| DXE47_RS02915 | 508349..508672 | - | 324 | WP_000174994.1 | hypothetical protein | - |
| DXE47_RS02920 | 508752..508913 | - | 162 | WP_001285948.1 | DUF1270 domain-containing protein | - |
| DXE47_RS02925 | 508926..509189 | - | 264 | WP_001596347.1 | helix-turn-helix domain-containing protein | - |
| DXE47_RS02930 | 509216..509431 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| DXE47_RS02935 | 509486..509851 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin |
| DXE47_RS02940 | 509820..510065 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin |
| DXE47_RS02945 | 510132..510512 | + | 381 | WP_000773059.1 | DUF2513 domain-containing protein | - |
| DXE47_RS02950 | 510499..510696 | - | 198 | WP_001148860.1 | hypothetical protein | - |
| DXE47_RS02955 | 510766..510978 | + | 213 | WP_000362644.1 | hypothetical protein | - |
| DXE47_RS15320 | 511019..511168 | - | 150 | WP_000771849.1 | hypothetical protein | - |
| DXE47_RS02960 | 511183..511626 | - | 444 | WP_000435357.1 | hypothetical protein | - |
| DXE47_RS02965 | 511644..511868 | - | 225 | WP_000333485.1 | DUF739 family protein | - |
| DXE47_RS02970 | 512030..512410 | + | 381 | WP_001089477.1 | helix-turn-helix domain-containing protein | - |
| DXE47_RS02975 | 512432..512890 | + | 459 | WP_001558059.1 | hypothetical protein | - |
| DXE47_RS02980 | 512908..513342 | + | 435 | WP_000755718.1 | hypothetical protein | - |
| DXE47_RS02985 | 513371..513766 | + | 396 | WP_001558060.1 | hypothetical protein | - |
| DXE47_RS02990 | 513856..514002 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| DXE47_RS02995 | 513999..514613 | - | 615 | WP_031863779.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 82 a.a. Molecular weight: 9468.72 Da Isoelectric Point: 5.7783
>T294191 WP_001025401.1 NZ_LT992468:c510065-509820 [Staphylococcus aureus]
MNIQEATKIATKNLVSMTRKDWKESHRTKILPTNDSFLQCIISNSDGTNLIRYWQPSADDLMANDWEVINPTRDQELLKQ
F
MNIQEATKIATKNLVSMTRKDWKESHRTKILPTNDSFLQCIISNSDGTNLIRYWQPSADDLMANDWEVINPTRDQELLKQ
F
Download Length: 246 bp
Antitoxin
Download Length: 366 bp
>AT294191 NZ_LT992468:509486-509851 [Staphylococcus aureus]
ATGCCCTTGATATCTGATGAATTTGATACACTTACTAAAGACCAACAATATATCTTGTCCGTACTCTACAAAGATTATTT
AGAATGTGTAAAGTTAGGTTCGGTTAAATTAACCTGCAATAATTTTGGAAGTGCTAAAGATATACATACAAAGTATTTTC
AAAAACTACATTTCGAAGATGTAAAATACGATTTAAATAAACTTAAAAACTCTGGGTTCCTAAACGGCGTGTATGCTAGT
AACACTATTTATCATGTAACAATTTCAGACAAGACTGTTGTTTACTTTGAAAATGAGTTTAAAAACAATTTAAAAAGTAT
CATTGATAGCATTTCTAAAATTGCTTCAATAATTCCTGGTCTCTAG
ATGCCCTTGATATCTGATGAATTTGATACACTTACTAAAGACCAACAATATATCTTGTCCGTACTCTACAAAGATTATTT
AGAATGTGTAAAGTTAGGTTCGGTTAAATTAACCTGCAATAATTTTGGAAGTGCTAAAGATATACATACAAAGTATTTTC
AAAAACTACATTTCGAAGATGTAAAATACGATTTAAATAAACTTAAAAACTCTGGGTTCCTAAACGGCGTGTATGCTAGT
AACACTATTTATCATGTAACAATTTCAGACAAGACTGTTGTTTACTTTGAAAATGAGTTTAAAAACAATTTAAAAAGTAT
CATTGATAGCATTTCTAAAATTGCTTCAATAATTCCTGGTCTCTAG
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|