Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) TMCS/-
Location 509486..510065 Replicon chromosome
Accession NZ_LT992468
Organism Staphylococcus aureus isolate 12_LA_293

Toxin (Protein)


Gene name MW1434 Uniprot ID A0A4P7P609
Locus tag DXE47_RS02940 Protein ID WP_001025401.1
Coordinates 509820..510065 (-) Length 82 a.a.

Antitoxin (RNA)


Gene name MW1433
Locus tag -
Coordinates 509486..509851 (+)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
DXE47_RS02900 506228..506782 - 555 WP_000647288.1 DUF2815 family protein -
DXE47_RS02905 506809..507975 - 1167 WP_031794951.1 DUF2800 domain-containing protein -
DXE47_RS02910 507972..508334 - 363 WP_000985976.1 hypothetical protein -
DXE47_RS02915 508349..508672 - 324 WP_000174994.1 hypothetical protein -
DXE47_RS02920 508752..508913 - 162 WP_001285948.1 DUF1270 domain-containing protein -
DXE47_RS02925 508926..509189 - 264 WP_001596347.1 helix-turn-helix domain-containing protein -
DXE47_RS02930 509216..509431 - 216 WP_001097552.1 hypothetical protein -
DXE47_RS02935 509486..509851 + 366 WP_001128433.1 hypothetical protein Antitoxin
DXE47_RS02940 509820..510065 - 246 WP_001025401.1 DUF2829 domain-containing protein Toxin
DXE47_RS02945 510132..510512 + 381 WP_000773059.1 DUF2513 domain-containing protein -
DXE47_RS02950 510499..510696 - 198 WP_001148860.1 hypothetical protein -
DXE47_RS02955 510766..510978 + 213 WP_000362644.1 hypothetical protein -
DXE47_RS15320 511019..511168 - 150 WP_000771849.1 hypothetical protein -
DXE47_RS02960 511183..511626 - 444 WP_000435357.1 hypothetical protein -
DXE47_RS02965 511644..511868 - 225 WP_000333485.1 DUF739 family protein -
DXE47_RS02970 512030..512410 + 381 WP_001089477.1 helix-turn-helix domain-containing protein -
DXE47_RS02975 512432..512890 + 459 WP_001558059.1 hypothetical protein -
DXE47_RS02980 512908..513342 + 435 WP_000755718.1 hypothetical protein -
DXE47_RS02985 513371..513766 + 396 WP_001558060.1 hypothetical protein -
DXE47_RS02990 513856..514002 + 147 WP_001013104.1 hypothetical protein -
DXE47_RS02995 513999..514613 - 615 WP_031863779.1 hypothetical protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(2-69)


Sequences


Toxin        


Download         Length: 82 a.a.        Molecular weight: 9468.72 Da        Isoelectric Point: 5.7783

>T294191 WP_001025401.1 NZ_LT992468:c510065-509820 [Staphylococcus aureus]
MNIQEATKIATKNLVSMTRKDWKESHRTKILPTNDSFLQCIISNSDGTNLIRYWQPSADDLMANDWEVINPTRDQELLKQ
F

Download         Length: 246 bp


Antitoxin


Download         Length: 366 bp

>AT294191 NZ_LT992468:509486-509851 [Staphylococcus aureus]
ATGCCCTTGATATCTGATGAATTTGATACACTTACTAAAGACCAACAATATATCTTGTCCGTACTCTACAAAGATTATTT
AGAATGTGTAAAGTTAGGTTCGGTTAAATTAACCTGCAATAATTTTGGAAGTGCTAAAGATATACATACAAAGTATTTTC
AAAAACTACATTTCGAAGATGTAAAATACGATTTAAATAAACTTAAAAACTCTGGGTTCCTAAACGGCGTGTATGCTAGT
AACACTATTTATCATGTAACAATTTCAGACAAGACTGTTGTTTACTTTGAAAATGAGTTTAAAAACAATTTAAAAAGTAT
CATTGATAGCATTTCTAAAATTGCTTCAATAATTCCTGGTCTCTAG

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A4P7P609


Antitoxin

Download structure file

References