Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) kacAT/DUF1778(antitoxin)
Location 4588350..4589160 Replicon chromosome
Accession NZ_LR890595
Organism Klebsiella pneumoniae isolate INF223-sc-2280103

Toxin (Protein)


Gene name KacT Uniprot ID A0A060VJ83
Locus tag JMW78_RS22195 Protein ID WP_004178461.1
Coordinates 4588350..4588883 (-) Length 178 a.a.

Antitoxin (Protein)


Gene name KacA Uniprot ID J2E9Q7
Locus tag JMW78_RS22200 Protein ID WP_002887278.1
Coordinates 4588894..4589160 (-) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JMW78_RS22190 4587181..4588302 + 1122 WP_009309849.1 cupin domain-containing protein -
JMW78_RS22195 4588350..4588883 - 534 WP_004178461.1 GNAT family N-acetyltransferase Toxin
JMW78_RS22200 4588894..4589160 - 267 WP_002887278.1 DUF1778 domain-containing protein Antitoxin
JMW78_RS22205 4589263..4590696 - 1434 WP_032446518.1 Cu(+)/Ag(+) sensor histidine kinase -
JMW78_RS22210 4590686..4591369 - 684 WP_002887273.1 copper response regulator transcription factor CusR -
JMW78_RS22215 4591541..4592923 + 1383 WP_114444933.1 efflux transporter outer membrane subunit -
JMW78_RS22220 4592941..4593285 + 345 WP_114444932.1 cation efflux system protein CusF -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(91-151)

Antitoxin

Vibrio phage ICP1, Orf50

(2-86)


Sequences

Toxin        


Download         Length: 178 a.a.        Molecular weight: 19810.65 Da        Isoelectric Point: 5.2614

>T291490 WP_004178461.1 NZ_LR890595:c4588883-4588350 [Klebsiella pneumoniae]
MEQQLTIEMIADAFSYDITGFDCGEEALNTFLKEHLKRQHDGQILRGYALVSGDTVPRLLGYYTLSGSCFERGMLPSKTQ
QKKIPYQNAPSVTLGRLAIDKSVQGQGWGEMLVAHAMRVVWGASKAVGIYGLFVEALNEKAKAFYLRLGFIQLVDENSNL
LFYPTKSIEQLFTDDES

Download         Length: 534 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9996.46 Da        Isoelectric Point: 10.1757

>AT291490 WP_002887278.1 NZ_LR890595:c4589160-4588894 [Klebsiella pneumoniae]
MPALKKQRIDLRLTDDDKSIIEEAAAISNQTITQFVVASASERAAEVIEQHRRMVLNEQSWSLVMEAITQPPAPNDRLKR
AAKRLQTR

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A060VJ83

Antitoxin

Source ID Structure
PDB 5ZGN
AlphaFold DB A0A0H3GLZ1

References