Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | Xre-MNT/HTH_26(antitoxin) |
Location | 12380..13488 | Replicon | plasmid 5 |
Accession | NZ_LR135239 | ||
Organism | Enterococcus faecium isolate E7067 |
Toxin (Protein)
Gene name | MNTss | Uniprot ID | A0A0M4MHJ8 |
Locus tag | EQB63_RS15810 | Protein ID | WP_002303392.1 |
Coordinates | 12619..13488 (+) | Length | 290 a.a. |
Antitoxin (Protein)
Gene name | Xress | Uniprot ID | B9DSK1 |
Locus tag | EQB63_RS15805 | Protein ID | WP_002303393.1 |
Coordinates | 12380..12604 (+) | Length | 75 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
EQB63_RS15785 | 8201..8881 | + | 681 | WP_001015311.1 | IS6-like element IS1216 family transposase | - |
EQB63_RS15790 | 8936..9871 | + | 936 | Protein_11 | ABC-F type ribosomal protection protein Lsa(E) | - |
EQB63_RS15795 | 9925..10728 | + | 804 | WP_002294514.1 | lincosamide nucleotidyltransferase Lnu(B) | - |
EQB63_RS15800 | 11416..12237 | + | 822 | Protein_13 | recombinase zinc beta ribbon domain-containing protein | - |
EQB63_RS15805 | 12380..12604 | + | 225 | WP_002303393.1 | helix-turn-helix transcriptional regulator | Antitoxin |
EQB63_RS15810 | 12619..13488 | + | 870 | WP_002303392.1 | nucleotidyltransferase domain-containing protein | Toxin |
EQB63_RS15815 | 13469..14203 | + | 735 | WP_000662263.1 | class I SAM-dependent methyltransferase | - |
EQB63_RS15820 | 14236..15144 | + | 909 | WP_001255866.1 | aminoglycoside nucleotidyltransferase ANT(6)-Ia | - |
EQB63_RS15825 | 15141..15389 | + | 249 | WP_002347175.1 | hypothetical protein | - |
EQB63_RS15830 | 15392..16300 | - | 909 | WP_002324522.1 | IS982-like element ISEfm1 family transposase | - |
EQB63_RS15835 | 16401..17696 | - | 1296 | WP_002297218.1 | ISL3-like element ISEfa11 family transposase | - |
EQB63_RS15840 | 17941..18192 | + | 252 | Protein_21 | GNAT family N-acetyltransferase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Non-Mobilizable plasmid | VanHAX / lnu(B) / ant(6)-Ia / aph(3')-III / erm(B) | - | 1..51960 | 51960 | |
- | inside | IScluster/Tn | VanHAX / lnu(B) / ant(6)-Ia / aph(3')-III / erm(B) | - | 4313..48735 | 44422 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 290 a.a. Molecular weight: 32807.38 Da Isoelectric Point: 4.7269
>T288088 WP_002303392.1 NZ_LR135239:12619-13488 [Enterococcus faecium]
MVGNVIQIVTEKLSSLPFIEGIVLGGSRARSTHTENSDIDIGIYYNSDSFDLTAINQIATELDDENRNNLVVPPGAWGDW
VNGGGWLVINGCHVDLILRDIKRVEQIIKDTEQGIVTANYQTGHPHGYISAMYRGELAISKILYAKNESLCELKKQAEIY
PTALKKSLMNFFIFEAEFSLMFVKANAGAEDKYYIAGHVFRIISCLNQVLFACNNAYCINEKKAIKLLETFEYKPEKYAE
RVNHIFEVLGLSLFECYDMTEKLYKEVNEIVSEINNFLNEESSDERKQI
MVGNVIQIVTEKLSSLPFIEGIVLGGSRARSTHTENSDIDIGIYYNSDSFDLTAINQIATELDDENRNNLVVPPGAWGDW
VNGGGWLVINGCHVDLILRDIKRVEQIIKDTEQGIVTANYQTGHPHGYISAMYRGELAISKILYAKNESLCELKKQAEIY
PTALKKSLMNFFIFEAEFSLMFVKANAGAEDKYYIAGHVFRIISCLNQVLFACNNAYCINEKKAIKLLETFEYKPEKYAE
RVNHIFEVLGLSLFECYDMTEKLYKEVNEIVSEINNFLNEESSDERKQI
Download Length: 870 bp
Antitoxin
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A0M4MHJ8 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A1M5SHM7 |