Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) yeeUV (cbtA-cbeA)/CbtA-CbeA
Location 1237152..1237830 Replicon chromosome
Accession NZ_CP125781
Organism Trabulsiella odontotermitis strain TBY01

Toxin (Protein)


Gene name yeeV Uniprot ID -
Locus tag QMG90_RS06015 Protein ID WP_080781780.1
Coordinates 1237152..1237475 (-) Length 108 a.a.

Antitoxin (Protein)


Gene name yeeU Uniprot ID -
Locus tag QMG90_RS06020 Protein ID WP_080781779.1
Coordinates 1237507..1237830 (-) Length 108 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QMG90_RS06005 (QMG90_06005) 1232688..1232984 - 297 Protein_1178 IS3 family transposase -
QMG90_RS06010 (QMG90_06010) 1233257..1236130 - 2874 WP_283283010.1 autotransporter outer membrane beta-barrel domain-containing protein -
QMG90_RS06015 (QMG90_06015) 1237152..1237475 - 324 WP_080781780.1 TA system toxin CbtA family protein Toxin
QMG90_RS06020 (QMG90_06020) 1237507..1237830 - 324 WP_080781779.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin
QMG90_RS06025 (QMG90_06025) 1237852..1238073 - 222 WP_080781778.1 DUF987 domain-containing protein -
QMG90_RS06030 (QMG90_06030) 1238082..1238552 - 471 WP_032642914.1 DNA repair protein RadC -
QMG90_RS06035 (QMG90_06035) 1238585..1239403 - 819 WP_080781777.1 DUF932 domain-containing protein -
QMG90_RS06040 (QMG90_06040) 1239749..1240660 + 912 WP_080781776.1 restriction endonuclease -
QMG90_RS06045 (QMG90_06045) 1240893..1241873 + 981 WP_117308960.1 IS5-like element ISKpn26 family transposase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- flank IS/Tn - - 1231639..1232619 980
- flank IS/Tn - - 1240893..1241873 980


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

CbtA toxin of type IV toxin-antitoxin system

(12-106)

Antitoxin

Antitoxin CbeA

(4-102)


Sequences

Toxin        


Download         Length: 108 a.a.        Molecular weight: 12047.85 Da        Isoelectric Point: 6.4783

>T282388 WP_080781780.1 NZ_CP125781:c1237475-1237152 [Trabulsiella odontotermitis]
MQISSVPATVPVSSRLSPVMVWQQLLTYLLEHHYGLTLNDTPFHDDTAIQGHIEAGITLADAVNFLVEKYELVRIDRKGF
SWQEQTPFITATDILRAKKSIGLLPRS

Download         Length: 324 bp

Antitoxin


Download         Length: 108 a.a.        Molecular weight: 12029.77 Da        Isoelectric Point: 6.3116

>AT282388 WP_080781779.1 NZ_CP125781:c1237830-1237507 [Trabulsiella odontotermitis]
MQNSWGLKRDISPCFGARLVQEGCRLHFLADRAGISGTFNEEEALCLDQAFPLVMKQLELMLTTGELNPRHQHCVTLYHN
GLTCEADTLGSHGYVYIVIYPQAFATR

Download         Length: 324 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References