Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) yeeUV (cbtA-cbeA)/CbtA-CbeA
Location 539382..540062 Replicon chromosome
Accession NZ_CP125781
Organism Trabulsiella odontotermitis strain TBY01

Toxin (Protein)


Gene name yeeV Uniprot ID -
Locus tag QMG90_RS02655 Protein ID WP_283282598.1
Coordinates 539742..540062 (+) Length 107 a.a.

Antitoxin (Protein)


Gene name yeeU Uniprot ID -
Locus tag QMG90_RS02650 Protein ID WP_283282597.1
Coordinates 539382..539705 (+) Length 108 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QMG90_RS02620 (QMG90_02620) 534411..535196 + 786 WP_283282592.1 hypothetical protein -
QMG90_RS02625 (QMG90_02625) 535414..535632 - 219 WP_283283868.1 AlpA family phage regulatory protein -
QMG90_RS02630 (QMG90_02630) 535724..536329 - 606 WP_283282593.1 inovirus Gp2 family protein -
QMG90_RS02635 (QMG90_02635) 536901..537857 + 957 WP_283282594.1 hypothetical protein -
QMG90_RS02640 (QMG90_02640) 538007..538828 + 822 WP_283282595.1 DUF932 domain-containing protein -
QMG90_RS02645 (QMG90_02645) 538899..539369 + 471 WP_283282596.1 DNA repair protein RadC -
QMG90_RS02650 (QMG90_02650) 539382..539705 + 324 WP_283282597.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin
QMG90_RS02655 (QMG90_02655) 539742..540062 + 321 WP_283282598.1 TA system toxin CbtA family protein Toxin
QMG90_RS02660 (QMG90_02660) 540176..540481 + 306 Protein_520 restriction endonuclease subunit M -
QMG90_RS02665 (QMG90_02665) 540544..541690 + 1147 Protein_521 IS3 family transposase -
QMG90_RS02670 (QMG90_02670) 541765..542163 + 399 WP_283283869.1 DUF1062 domain-containing protein -
QMG90_RS02675 (QMG90_02675) 542456..542821 - 366 WP_283282599.1 FaeA/PapI family transcriptional regulator -
QMG90_RS02680 (QMG90_02680) 542992..543729 + 738 WP_283282600.1 winged helix-turn-helix domain-containing protein -
QMG90_RS02685 (QMG90_02685) 543722..544189 + 468 WP_283282601.1 FidL-like protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Genomic island - - 526917..544189 17272


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

CbtA toxin of type IV toxin-antitoxin system

(5-105)

Antitoxin

Antitoxin CbeA

(7-106)


Sequences

Toxin        


Download         Length: 107 a.a.        Molecular weight: 12040.72 Da        Isoelectric Point: 5.4654

>T282386 WP_283282598.1 NZ_CP125781:539742-540062 [Trabulsiella odontotermitis]
MHISTVPATVPVSSRLSPIQVWQQLLTYLLDHHYGLTLDDTPFHDDAAILEHIEAGITLADAVNFLVERYELVRIDRKGF
TWQEQTPFLTATDILRARRATGLINT

Download         Length: 321 bp

Antitoxin


Download         Length: 108 a.a.        Molecular weight: 12258.13 Da        Isoelectric Point: 8.4805

>AT282386 WP_283282597.1 NZ_CP125781:539382-539705 [Trabulsiella odontotermitis]
MPFIPPHEWRLQSDITPRFGARLVQEGNRLYYLADRAGLTGEFTLKQLQKLDQAFPLFIRQLEAMLRSGELNPQQQRQVT
IQLASLTCIADTRGSCGYVYISIYPTP

Download         Length: 324 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References