Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | paaR-paaA-parE/- |
| Location | 2963097..2963568 | Replicon | chromosome |
| Accession | NZ_CP124359 | ||
| Organism | Escherichia coli strain AVS0093 | ||
Toxin (Protein)
| Gene name | parE_1 | Uniprot ID | A0A0D7C2L1 |
| Locus tag | QJP83_RS14605 | Protein ID | WP_001303511.1 |
| Coordinates | 2963290..2963568 (+) | Length | 93 a.a. |
Antitoxin (Protein)
| Gene name | paaA | Uniprot ID | Q8XAD5 |
| Locus tag | QJP83_RS14600 | Protein ID | WP_001302048.1 |
| Coordinates | 2963097..2963288 (+) | Length | 64 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP83_RS14530 (2958164) | 2958164..2958331 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJP83_RS14535 (2958342) | 2958342..2958605 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJP83_RS14540 (2958607) | 2958607..2958825 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJP83_RS14545 (2958827) | 2958827..2959042 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJP83_RS14550 (2959043) | 2959043..2959402 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJP83_RS14555 (2959399) | 2959399..2959575 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJP83_RS14560 (2959568) | 2959568..2959750 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJP83_RS14565 (2959879) | 2959879..2960190 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJP83_RS14570 (2960183) | 2960183..2960437 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJP83_RS14575 (2960434) | 2960434..2960856 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJP83_RS14580 (2960897) | 2960897..2961859 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP83_RS14585 (2961882) | 2961882..2962307 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP83_RS14590 (2962304) | 2962304..2962606 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJP83_RS14595 (2962705) | 2962705..2963076 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP83_RS14600 (2963097) | 2963097..2963288 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin |
| QJP83_RS14605 (2963290) | 2963290..2963568 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| QJP83_RS14610 (2963860) | 2963860..2964012 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP83_RS14615 (2964024) | 2964024..2964362 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP83_RS14620 (2964351) | 2964351..2964545 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP83_RS14625 (2965112) | 2965112..2965300 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJP83_RS14630 (2965297) | 2965297..2965485 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJP83_RS14635 (2965581) | 2965581..2968052 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJP83_RS14640 (2968114) | 2968114..2968383 | + | 270 | WP_000003742.1 | excisionase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Genomic island | - | - | 2944870..2972778 | 27908 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|