Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | paaR-paaA-parE/- |
| Location | 2964639..2965110 | Replicon | chromosome |
| Accession | NZ_CP124345 | ||
| Organism | Escherichia coli strain AVS0530 | ||
Toxin (Protein)
| Gene name | parE_1 | Uniprot ID | A0A0D7C2L1 |
| Locus tag | QJP77_RS14595 | Protein ID | WP_001303511.1 |
| Coordinates | 2964832..2965110 (+) | Length | 93 a.a. |
Antitoxin (Protein)
| Gene name | paaA | Uniprot ID | Q8XAD5 |
| Locus tag | QJP77_RS14590 | Protein ID | WP_001302048.1 |
| Coordinates | 2964639..2964830 (+) | Length | 64 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP77_RS14520 (2959706) | 2959706..2959873 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJP77_RS14525 (2959884) | 2959884..2960147 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJP77_RS14530 (2960149) | 2960149..2960367 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJP77_RS14535 (2960369) | 2960369..2960584 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJP77_RS14540 (2960585) | 2960585..2960944 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJP77_RS14545 (2960941) | 2960941..2961117 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJP77_RS14550 (2961110) | 2961110..2961292 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJP77_RS14555 (2961421) | 2961421..2961732 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJP77_RS14560 (2961725) | 2961725..2961979 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJP77_RS14565 (2961976) | 2961976..2962398 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJP77_RS14570 (2962439) | 2962439..2963401 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP77_RS14575 (2963424) | 2963424..2963849 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP77_RS14580 (2963846) | 2963846..2964148 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJP77_RS14585 (2964247) | 2964247..2964618 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP77_RS14590 (2964639) | 2964639..2964830 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin |
| QJP77_RS14595 (2964832) | 2964832..2965110 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| QJP77_RS14600 (2965402) | 2965402..2965554 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP77_RS14605 (2965566) | 2965566..2965904 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP77_RS14610 (2965893) | 2965893..2966087 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP77_RS14615 (2966654) | 2966654..2966842 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJP77_RS14620 (2966839) | 2966839..2967027 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJP77_RS14625 (2967123) | 2967123..2969594 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJP77_RS14630 (2969656) | 2969656..2969925 | + | 270 | WP_000003742.1 | excisionase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | sitABCD | - | 2857403..2978180 | 120777 | |
| - | inside | Prophage | sitABCD | - | 2829559..2978180 | 148621 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|