Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yefM-yoeB (relBE)/YoeB-YefM
Location 851468..851973 Replicon chromosome
Accession NZ_CP123498
Organism Arsenophonus nasoniae strain aIh

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag QE207_RS06060 Protein ID WP_280629725.1
Coordinates 851468..851725 (-) Length 86 a.a.

Antitoxin (Protein)


Gene name yefM Uniprot ID -
Locus tag QE207_RS06065 Protein ID WP_280629726.1
Coordinates 851722..851973 (-) Length 84 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QE207_RS06045 (QE207_06040) 847906..848523 + 618 WP_026822391.1 outer membrane lipoprotein chaperone LolA -
QE207_RS06050 (QE207_06045) 848525..849868 + 1344 WP_280629723.1 replication-associated recombination protein A -
QE207_RS06055 (QE207_06050) 849978..851270 + 1293 WP_280629724.1 serine--tRNA ligase -
QE207_RS06060 (QE207_06055) 851468..851725 - 258 WP_280629725.1 Txe/YoeB family addiction module toxin Toxin
QE207_RS06065 (QE207_06060) 851722..851973 - 252 WP_280629726.1 YoeB-YefM toxin-antitoxin system antitoxin YefM Antitoxin
QE207_RS06070 (QE207_06065) 852674..854695 + 2022 Protein_791 RHS repeat protein -
QE207_RS06075 (QE207_06070) 856063..856803 - 741 WP_280629727.1 pyruvate formate lyase 1-activating protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(5-84)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-74)


Sequences

Toxin        


Download         Length: 86 a.a.        Molecular weight: 10441.15 Da        Isoelectric Point: 9.9171

>T279000 WP_280629725.1 NZ_CP123498:c851725-851468 [Arsenophonus nasoniae]
MKLIFTEQSWNDYLYWQQIDKKIIKRINELIKEIKREPFSGIGKPEPLKHNLTGFWSRRITEEHRLIYRLTDKGLEIPSC
RYLYN

Download         Length: 258 bp

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 9401.65 Da        Isoelectric Point: 4.4217

>AT279000 WP_280629726.1 NZ_CP123498:c851973-851722 [Arsenophonus nasoniae]
MKTVNYTDARQNLTSIMNEAIDDRIPILITRQKGVPCVLLSLDEYQSLEETAYLLRSPANARHLLDSIDELNAGKGIERD
IQE

Download         Length: 252 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References