Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | mosAT/AbiEii-AbiEi |
| Location | 712254..713976 | Replicon | chromosome |
| Accession | NZ_CP119546 | ||
| Organism | Providencia stuartii strain CAVP490 | ||
Toxin (Protein)
| Gene name | mosT | Uniprot ID | - |
| Locus tag | P2E05_RS03040 | Protein ID | WP_276123004.1 |
| Coordinates | 713038..713976 (+) | Length | 313 a.a. |
Antitoxin (Protein)
| Gene name | mosA | Uniprot ID | A0A6G6SM63 |
| Locus tag | P2E05_RS03035 | Protein ID | WP_036973704.1 |
| Coordinates | 712254..713045 (+) | Length | 264 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P2E05_RS03005 (P2E05_03005) | 707927..708208 | + | 282 | WP_004249354.1 | type IV conjugative transfer system protein TraL | - |
| P2E05_RS03010 (P2E05_03010) | 708205..708831 | + | 627 | WP_004249355.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| P2E05_RS03015 (P2E05_03015) | 708815..709711 | + | 897 | WP_004249356.1 | type-F conjugative transfer system secretin TraK | - |
| P2E05_RS03020 (P2E05_03020) | 709714..711003 | + | 1290 | WP_004249357.1 | TraB/VirB10 family protein | - |
| P2E05_RS21405 | 711429..711650 | + | 222 | WP_282563722.1 | TraV family lipoprotein | - |
| P2E05_RS03030 (P2E05_03030) | 711647..712033 | + | 387 | WP_004249359.1 | TraA family conjugative transfer protein | - |
| P2E05_RS03035 (P2E05_03035) | 712254..713045 | + | 792 | WP_036973704.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin |
| P2E05_RS03040 (P2E05_03040) | 713038..713976 | + | 939 | WP_276123004.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin |
| P2E05_RS03045 (P2E05_03045) | 714108..714800 | + | 693 | WP_004249363.1 | DsbC family protein | - |
| P2E05_RS03050 (P2E05_03050) | 714800..717199 | + | 2400 | WP_004249365.1 | type IV secretion system protein TraC | - |
| P2E05_RS03055 (P2E05_03055) | 717192..717539 | + | 348 | WP_004249366.1 | hypothetical protein | - |
| P2E05_RS03060 (P2E05_03060) | 717523..718035 | + | 513 | WP_004249367.1 | S26 family signal peptidase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Integrative and Conjugative Element | - | - | 664405..862230 | 197825 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 313 a.a. Molecular weight: 35541.77 Da Isoelectric Point: 4.9969
>T274183 WP_276123004.1 NZ_CP119546:713038-713976 [Providencia stuartii]
MDKDSPYYKQVSLLIRLLPVVATETVFALKGGTAINLFVRDFPRLSVDIDLAYLPLEPRNEALINVRAALQRITDRINTQ
PDIRAAFQDNKADELRIVVSSPVATIKIEVSPVARGTLHSAEIMPVQESVEDEFGYAEIQVVSLPDLYGGKLCAAMDRQH
PRDLFDVRMLLGSEGISREILVGFLTYTLSHPQPINEVMSPNWQHLNEKFQAEFDGMTFEKVECEDLASVRPMMLIELQK
HFTERDHAFLMSFKRGQPDWALFDYPNAADLPAIRWKLQNINKLAKNQAKHQEQLDKLKQVLDDWLVNANAE
MDKDSPYYKQVSLLIRLLPVVATETVFALKGGTAINLFVRDFPRLSVDIDLAYLPLEPRNEALINVRAALQRITDRINTQ
PDIRAAFQDNKADELRIVVSSPVATIKIEVSPVARGTLHSAEIMPVQESVEDEFGYAEIQVVSLPDLYGGKLCAAMDRQH
PRDLFDVRMLLGSEGISREILVGFLTYTLSHPQPINEVMSPNWQHLNEKFQAEFDGMTFEKVECEDLASVRPMMLIELQK
HFTERDHAFLMSFKRGQPDWALFDYPNAADLPAIRWKLQNINKLAKNQAKHQEQLDKLKQVLDDWLVNANAE
Download Length: 939 bp
Antitoxin
Download Length: 264 a.a. Molecular weight: 30113.48 Da Isoelectric Point: 9.5097
>AT274183 WP_036973704.1 NZ_CP119546:712254-713045 [Providencia stuartii]
MSSKINWLIAHTSPGALVLQQWLTENGVSYSLAQKYAQNGWLKKLSSGVYYRPNAQGDIKPTWVDAIQALDVQLGVSVHL
AGLSSLTHQGLSHYLQLNKEQVWICVKNKSSLPKWFREFPYQNWFYCGNHKLEVNPEKDLKRITVKEKELTVSCAELAAY
EVVDAIGKLISFEHVAELFQGLVNLSPRKVQDILERSSSVQANRIFLFLGRYYDHQWVNRIDETRIKLGAGKRQVVEKGR
FDERYQITVPEILSVKKGEQHNG
MSSKINWLIAHTSPGALVLQQWLTENGVSYSLAQKYAQNGWLKKLSSGVYYRPNAQGDIKPTWVDAIQALDVQLGVSVHL
AGLSSLTHQGLSHYLQLNKEQVWICVKNKSSLPKWFREFPYQNWFYCGNHKLEVNPEKDLKRITVKEKELTVSCAELAAY
EVVDAIGKLISFEHVAELFQGLVNLSPRKVQDILERSSSVQANRIFLFLGRYYDHQWVNRIDETRIKLGAGKRQVVEKGR
FDERYQITVPEILSVKKGEQHNG
Download Length: 792 bp
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|