Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) ataRT/DUF1778(antitoxin)
Location 1705071..1705936 Replicon chromosome
Accession NZ_CP114029
Organism Jiella sp. HL-NP1

Toxin (Protein)


Gene name ataT Uniprot ID -
Locus tag OH818_RS09305 Protein ID WP_268882736.1
Coordinates 1705400..1705936 (+) Length 179 a.a.

Antitoxin (Protein)


Gene name ataR Uniprot ID -
Locus tag OH818_RS09300 Protein ID WP_268882735.1
Coordinates 1705071..1705412 (+) Length 114 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OH818_RS09275 (OH818_09285) 1700273..1701245 + 973 Protein_1612 ABC transporter substrate-binding protein -
OH818_RS09280 (OH818_09290) 1701245..1702282 + 1038 WP_268882733.1 iron chelate uptake ABC transporter family permease subunit -
OH818_RS09285 (OH818_09295) 1702279..1703044 + 766 Protein_1614 ABC transporter ATP-binding protein -
OH818_RS09290 (OH818_09300) 1703134..1703565 + 432 WP_268883681.1 DMT family transporter -
OH818_RS09295 (OH818_09305) 1703601..1703951 + 351 WP_268882734.1 hypothetical protein -
OH818_RS09300 (OH818_09310) 1705071..1705412 + 342 WP_268882735.1 DUF1778 domain-containing protein Antitoxin
OH818_RS09305 (OH818_09315) 1705400..1705936 + 537 WP_268882736.1 GNAT family N-acetyltransferase Toxin
OH818_RS09310 (OH818_09320) 1706167..1707672 - 1506 WP_268882737.1 P-loop NTPase fold protein -
OH818_RS09315 (OH818_09325) 1707853..1708950 + 1098 WP_268882738.1 carboxynorspermidine decarboxylase -
OH818_RS09320 (OH818_09330) 1708989..1710233 + 1245 WP_268882739.1 saccharopine dehydrogenase family protein -
OH818_RS09325 (OH818_09335) 1710341..1710727 - 387 WP_268882740.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(51-151)

Antitoxin

Vibrio phage ICP1, Orf50

(32-108)


Sequences

Toxin        


Download         Length: 179 a.a.        Molecular weight: 19095.77 Da        Isoelectric Point: 6.2400

>T266213 WP_268882736.1 NZ_CP114029:1705400-1705936 [Jiella sp. HL-NP1]
MAEIGDAPERPDTGLSAPVPLTAAHDVSGFDCGEPSLNDWLRHRALKNESRFSRSYVVCEGYRVVAFVCISAGSVERGAA
PGKVRRNAPETIPVSVIGRLAVDRDFAGKGLSADMLSDALRRIALASQSIGMGAVLVHAKDEAAKRFYLRCAEFIAYPED
GRTLFLPIETVVAAFGET

Download         Length: 537 bp

Antitoxin


Download         Length: 114 a.a.        Molecular weight: 12618.40 Da        Isoelectric Point: 10.3342

>AT266213 WP_268882735.1 NZ_CP114029:1705071-1705412 [Jiella sp. HL-NP1]
MSKARPSSSENPDPEAVMVAERSSAAGTKRSINLRIETNTRRLIDDAAAVLGKTRTEFMVESARRQAIDVLLDQRLFVLD
SERYDAFIDALDNPPAPGPKLRALLRRVPAWQK

Download         Length: 342 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References