Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) Hha-TomB/-
Location 1478099..1478718 Replicon chromosome
Accession NZ_CP107312
Organism Klebsiella pneumoniae strain CRKP_41

Toxin (Protein)


Gene name Hha Uniprot ID R8WYV2
Locus tag OH506_RS07465 Protein ID WP_002892050.1
Coordinates 1478500..1478718 (+) Length 73 a.a.

Antitoxin (Protein)


Gene name TomB Uniprot ID J2DPF6
Locus tag OH506_RS07460 Protein ID WP_002892066.1
Coordinates 1478099..1478473 (+) Length 125 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OH506_RS07450 1473251..1474444 + 1194 WP_002892072.1 multidrug efflux RND transporter periplasmic adaptor subunit AcrA -
OH506_RS07455 1474467..1477613 + 3147 WP_020326861.1 multidrug efflux RND transporter permease subunit AcrB -
OH506_RS07460 1478099..1478473 + 375 WP_002892066.1 Hha toxicity modulator TomB Antitoxin
OH506_RS07465 1478500..1478718 + 219 WP_002892050.1 HHA domain-containing protein Toxin
OH506_RS07470 1478877..1479443 + 567 WP_002892030.1 maltose O-acetyltransferase -
OH506_RS07475 1479415..1479555 - 141 WP_004147370.1 hypothetical protein -
OH506_RS07480 1479576..1480046 + 471 WP_002892026.1 YlaC family protein -
OH506_RS07485 1480021..1481472 - 1452 WP_002892023.1 PLP-dependent aminotransferase family protein -
OH506_RS07490 1481573..1482271 + 699 WP_002892021.1 GNAT family protein -
OH506_RS07495 1482268..1482408 - 141 WP_002892018.1 type B 50S ribosomal protein L36 -
OH506_RS07500 1482408..1482671 - 264 WP_002892011.1 type B 50S ribosomal protein L31 -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Haemolysin expression modulating, HHA

(13-69)

Antitoxin

Biofilm formation regulator YbaJ

(1-116)


Sequences

Toxin        


Download         Length: 73 a.a.        Molecular weight: 8628.00 Da        Isoelectric Point: 8.9008

>T260723 WP_002892050.1 NZ_CP107312:1478500-1478718 [Klebsiella pneumoniae]
MSDKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPTSVWKFIR

Download         Length: 219 bp

Antitoxin


Download         Length: 125 a.a.        Molecular weight: 14368.06 Da        Isoelectric Point: 4.8989

>AT260723 WP_002892066.1 NZ_CP107312:1478099-1478473 [Klebsiella pneumoniae]
MDEYSPKRHDIAQLRFLCETLYHDCLANLEESNHGWVNDPTSAVNLQLNELIEHIATFALNYKIKYAEDNKLIAQVDEYL
DDTFTLFSNYGINSTDLQKWKKSGNRLFRCFVNASRENPASLSC

Download         Length: 375 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2P8K6F2

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GJ93

References