Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/Txe-YefM |
| Location | 3739059..3739588 | Replicon | chromosome |
| Accession | NZ_CP096844 | ||
| Organism | Mycobacterium tuberculosis variant bovis strain Mb1855 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | G0TI95 |
| Locus tag | M1776_RS17590 | Protein ID | WP_003417760.1 |
| Coordinates | 3739331..3739588 (+) | Length | 86 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | G0TI94 |
| Locus tag | M1776_RS17585 | Protein ID | WP_003417757.1 |
| Coordinates | 3739059..3739334 (+) | Length | 92 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M1776_RS17550 (M1776_17555) | 3735632..3736321 | - | 690 | WP_003917774.1 | BBE domain-containing protein | - |
| M1776_RS17555 (M1776_17560) | 3736508..3736879 | - | 372 | WP_003417739.1 | FAD-binding protein | - |
| M1776_RS17560 (M1776_17565) | 3736777..3736995 | - | 219 | WP_157132559.1 | hypothetical protein | - |
| M1776_RS17565 (M1776_17570) | 3737022..3737282 | - | 261 | WP_003417741.1 | hypothetical protein | - |
| M1776_RS17570 (M1776_17575) | 3737397..3737786 | + | 390 | WP_010950876.1 | DUF732 domain-containing protein | - |
| M1776_RS17575 (M1776_17580) | 3737800..3738093 | - | 294 | WP_003417749.1 | DUF3017 domain-containing protein | - |
| M1776_RS17580 (M1776_17585) | 3738090..3738935 | - | 846 | WP_010950877.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| M1776_RS17585 (M1776_17590) | 3739059..3739334 | + | 276 | WP_003417757.1 | type II toxin-antitoxin system antitoxin RelJ | Antitoxin |
| M1776_RS17590 (M1776_17595) | 3739331..3739588 | + | 258 | WP_003417760.1 | Txe/YoeB family addiction module toxin | Toxin |
| M1776_RS17595 (M1776_17600) | 3739630..3740820 | + | 1191 | WP_003900033.1 | NADH:flavin oxidoreductase | - |
| M1776_RS17600 (M1776_17605) | 3740937..3741305 | + | 369 | WP_003417765.1 | FHA domain-containing protein | - |
| M1776_RS17605 (M1776_17610) | 3741302..3741853 | - | 552 | WP_003417767.1 | pentapeptide repeat protein MfpA | - |
| M1776_RS17610 (M1776_17615) | 3741860..3742441 | - | 582 | WP_003417769.1 | ATP/GTP-binding protein | - |
| M1776_RS17615 (M1776_17620) | 3742422..3742790 | - | 369 | WP_003417772.1 | DUF742 domain-containing protein | - |
| M1776_RS17620 (M1776_17625) | 3742768..3743160 | - | 393 | WP_011799344.1 | serine protease inhibitor | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 86 a.a. Molecular weight: 10070.30 Da Isoelectric Point: 6.4693
>T243843 WP_003417760.1 NZ_CP096844:3739331-3739588 [Mycobacterium tuberculosis variant bovis]
VRSVNFDPDAWEDFLFWLAADRKTARRITRLIGEIQRDPFSGIGKPEPLQGELSGYWSRRIDDEHRLVYRAGDDEVTMLK
ARYHY
VRSVNFDPDAWEDFLFWLAADRKTARRITRLIGEIQRDPFSGIGKPEPLQGELSGYWSRRIDDEHRLVYRAGDDEVTMLK
ARYHY
Download Length: 258 bp
>T243843 NZ_OX637964:1833143-1833397 [Escherichia coli O25b:H4-ST131]
GTGAAACTAATCTGGTCTGAGGAATCATGGGATGATTATCTGTACTGGCAGGAAGCAGATAAGCGAATTGTTAAAAAGAT
CAATGAACTTATCAAAGATACCCGCAGAACACCATTTGAAGGTAAGGGGAAACCAGAACCCCTGAAACATAACTTGTCAG
GTTTCTGGTCCCGACGCATTACAGAGGAGCACCTTCTGGTATACGCGGTTACTGATGATTCACTGCTCATTGCAGCATGT
CGTTATCATTATTGA
GTGAAACTAATCTGGTCTGAGGAATCATGGGATGATTATCTGTACTGGCAGGAAGCAGATAAGCGAATTGTTAAAAAGAT
CAATGAACTTATCAAAGATACCCGCAGAACACCATTTGAAGGTAAGGGGAAACCAGAACCCCTGAAACATAACTTGTCAG
GTTTCTGGTCCCGACGCATTACAGAGGAGCACCTTCTGGTATACGCGGTTACTGATGATTCACTGCTCATTGCAGCATGT
CGTTATCATTATTGA
Antitoxin
Download Length: 92 a.a. Molecular weight: 10194.35 Da Isoelectric Point: 4.6652
>AT243843 WP_003417757.1 NZ_CP096844:3739059-3739334 [Mycobacterium tuberculosis variant bovis]
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARRLMEAVARDKAGHSAFTKSV
DELREMAGGEE
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARRLMEAVARDKAGHSAFTKSV
DELREMAGGEE
Download Length: 276 bp
>AT243843 NZ_OX637964:1832895-1833146 [Escherichia coli O25b:H4-ST131]
ATGCGTACAATTAGCTACAGCGAAGCGCGTCAGAATTTGTCGGCAACAATGATGAAAGCCGTTGAAGATCATGCCCCGAT
CCTCATTACTCGTCAGAATGGAGAGGCTTGTGTTCTGATGTCACTCGAAGAATACAACTCGCTGGAAGAGACGGCTTATC
TACTGCGTTCCCCCGCTAACGCCCGGAGATTGATGGACTCAATCGATAGCCTGAAATCAGACAAAGGAACGGAAAAGGAC
ATTATTGAGTGA
ATGCGTACAATTAGCTACAGCGAAGCGCGTCAGAATTTGTCGGCAACAATGATGAAAGCCGTTGAAGATCATGCCCCGAT
CCTCATTACTCGTCAGAATGGAGAGGCTTGTGTTCTGATGTCACTCGAAGAATACAACTCGCTGGAAGAGACGGCTTATC
TACTGCGTTCCCCCGCTAACGCCCGGAGATTGATGGACTCAATCGATAGCCTGAAATCAGACAAAGGAACGGAAAAGGAC
ATTATTGAGTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|