Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/ParE-DnaT |
Location | 1815886..1816408 | Replicon | chromosome |
Accession | NZ_CP094322 | ||
Organism | Edwardsiella anguillarum strain 43664 |
Toxin (Protein)
Gene name | relE | Uniprot ID | C5BBL4 |
Locus tag | MQ093_RS08430 | Protein ID | WP_015871319.1 |
Coordinates | 1815886..1816167 (-) | Length | 94 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | C5BBL3 |
Locus tag | MQ093_RS08435 | Protein ID | WP_015871318.1 |
Coordinates | 1816157..1816408 (-) | Length | 84 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
MQ093_RS08415 (MQ093_08410) | 1811273..1812049 | + | 777 | WP_283294719.1 | hypothetical protein | - |
MQ093_RS08420 (MQ093_08415) | 1812042..1813703 | + | 1662 | WP_283294840.1 | terminase | - |
MQ093_RS08425 (MQ093_08420) | 1813700..1815814 | + | 2115 | WP_283294720.1 | portal protein | - |
MQ093_RS08430 (MQ093_08425) | 1815886..1816167 | - | 282 | WP_015871319.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
MQ093_RS08435 (MQ093_08430) | 1816157..1816408 | - | 252 | WP_015871318.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
MQ093_RS08440 (MQ093_08435) | 1816696..1817187 | + | 492 | WP_283294721.1 | hypothetical protein | - |
MQ093_RS08445 (MQ093_08440) | 1817174..1817488 | + | 315 | WP_283294722.1 | hypothetical protein | - |
MQ093_RS08450 (MQ093_08445) | 1817893..1819767 | + | 1875 | WP_045427621.1 | PhoX family phosphatase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 1780956..1826375 | 45419 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 94 a.a. Molecular weight: 10783.62 Da Isoelectric Point: 10.6993
>T239633 WP_015871319.1 NZ_CP094322:c1816167-1815886 [Edwardsiella anguillarum]
MTYKLSFEKRALKEWKKLAPPIQSQLKKKLIERLENPHVPAARLSGRANRYKIKLRSSGYRLVYEVNDSEIILLVIAIGK
RADNEVYQAADSR
MTYKLSFEKRALKEWKKLAPPIQSQLKKKLIERLENPHVPAARLSGRANRYKIKLRSSGYRLVYEVNDSEIILLVIAIGK
RADNEVYQAADSR
Download Length: 282 bp
>T239633 NZ_LS483296:1854437-1854691 [Escherichia coli]
GTGAAACTAATCTGGTCTGAGGAATCATGGGATGATTATCTGTACTGGCAGGAAACAGATAAGCGAATTGTTAAAAAGAT
CAATGAACTTATCAAAGATACCCGCAGAACGCCATTTGAAGGTAAGGGGAAGCCAGAACCCCTGAAACATAATTTGTCAG
GTTTCTGGTCCCGACGCATTACAGAGGAGCACCGTCTGGTATACGCGGTTACCGACGATTCACTGCTCATTGCAGCATGT
CGTTATCATTATTGA
GTGAAACTAATCTGGTCTGAGGAATCATGGGATGATTATCTGTACTGGCAGGAAACAGATAAGCGAATTGTTAAAAAGAT
CAATGAACTTATCAAAGATACCCGCAGAACGCCATTTGAAGGTAAGGGGAAGCCAGAACCCCTGAAACATAATTTGTCAG
GTTTCTGGTCCCGACGCATTACAGAGGAGCACCGTCTGGTATACGCGGTTACCGACGATTCACTGCTCATTGCAGCATGT
CGTTATCATTATTGA
Antitoxin
Download Length: 84 a.a. Molecular weight: 9155.24 Da Isoelectric Point: 3.7550
>AT239633 WP_015871318.1 NZ_CP094322:c1816408-1816157 [Edwardsiella anguillarum]
MAYQILTTTAASITDLKRNPMGTIAEGDGNAVAILNRNEPAFYCVPPELYAYYLELAEDAALNRIADERLEDAEFVSVNI
DDL
MAYQILTTTAASITDLKRNPMGTIAEGDGNAVAILNRNEPAFYCVPPELYAYYLELAEDAALNRIADERLEDAEFVSVNI
DDL
Download Length: 252 bp
>AT239633 NZ_LS483296:1854189-1854440 [Escherichia coli]
ATGCGTACAATTAGCTACAGCGAAGCGCGTCAGAATTTGTCGGCAACAATGATGAAAGCCGTTGAAGATCATGCCCCGAT
CCTTATTACTCGTCAGAATGGAGAGGCTTGTGTTCTGATGTCACTCGAAGAATACAACTCGCTGGAAGAGACGGCTTATC
TACTGCGCTCCCCCGCTAACGCCCGGAGATTGATGGACTCAATCGATAGCCTGAAATCAGGCAAAGGAACAGAAAAGGAC
ATTATTGAGTGA
ATGCGTACAATTAGCTACAGCGAAGCGCGTCAGAATTTGTCGGCAACAATGATGAAAGCCGTTGAAGATCATGCCCCGAT
CCTTATTACTCGTCAGAATGGAGAGGCTTGTGTTCTGATGTCACTCGAAGAATACAACTCGCTGGAAGAGACGGCTTATC
TACTGCGCTCCCCCGCTAACGCCCGGAGATTGATGGACTCAATCGATAGCCTGAAATCAGGCAAAGGAACAGAAAAGGAC
ATTATTGAGTGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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