Detailed information of TA system
Overview
TA module
| Type | VIII | Classification (family/domain) | SdsR-RyeA/- |
| Location | 2357913..2358059 | Replicon | chromosome |
| Accession | NZ_CP093332 | ||
| Organism | Buttiauxella ferragutiae strain H4-C11 | ||
Toxin (RNA)
| Gene name | SdsR | ||
| Locus tag | - | ||
| Coordinates | 2357948..2358052 (+) |
Antitoxin (RNA)
| Gene name | RyeA | ||
| Locus tag | - | ||
| Coordinates | 2357913..2358059 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MNO13_RS10830 (MNO13_10830) | 2354233..2354895 | - | 663 | WP_064545921.1 | exodeoxyribonuclease X | - |
| MNO13_RS10835 (MNO13_10835) | 2354934..2355665 | - | 732 | WP_121813648.1 | carbon-nitrogen hydrolase family protein | - |
| MNO13_RS10840 (MNO13_10840) | 2355797..2356027 | - | 231 | WP_034495983.1 | DNA polymerase III subunit theta | - |
| MNO13_RS10845 (MNO13_10845) | 2356176..2356550 | + | 375 | WP_064545923.1 | CopC domain-containing protein YobA | - |
| MNO13_RS10850 (MNO13_10850) | 2356556..2357428 | + | 873 | WP_241939973.1 | copper homeostasis membrane protein CopD | - |
| MNO13_RS10855 (MNO13_10855) | 2357455..2357796 | + | 342 | WP_241939974.1 | YebY family protein | - |
| - | 2357913..2358059 | - | 147 | - | - | Antitoxin |
| - | 2357948..2358052 | + | 105 | - | - | Toxin |
| MNO13_RS10860 (MNO13_10860) | 2358671..2359249 | + | 579 | WP_241939975.1 | serine acetyltransferase | - |
| MNO13_RS10865 (MNO13_10865) | 2359427..2359741 | - | 315 | WP_064546043.1 | BON domain-containing protein | - |
| MNO13_RS10870 (MNO13_10870) | 2359817..2360656 | - | 840 | WP_241940065.1 | transporter substrate-binding domain-containing protein | - |
| MNO13_RS10875 (MNO13_10875) | 2360984..2362474 | + | 1491 | WP_241939976.1 | SulP family inorganic anion transporter | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 105 bp
>T238163 NZ_CP093332:2357948-2358052 [Buttiauxella ferragutiae]
GGCAAGGCGAAGTCTGCCTGCATTAATGCCAACTTTTAGCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATA
TAGGAATCGTATTCGGTCTTTTTTT
GGCAAGGCGAAGTCTGCCTGCATTAATGCCAACTTTTAGCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATA
TAGGAATCGTATTCGGTCTTTTTTT
Antitoxin
Download Length: 147 bp
>AT238163 NZ_CP093332:c2358059-2357913 [Buttiauxella ferragutiae]
ACAGATAAAAAAAAGACCGAATACGATTCCTATATTCGGTCCAGGGAAATGGCTCTTGGGAGAGAGCCGTGCGCTAAAAG
TTGGCATTAATGCAGGCAGACTTCGCCTTGCCTTCTAAGAATAGTTTACCGGCGCAGCTTTTCCAGT
ACAGATAAAAAAAAGACCGAATACGATTCCTATATTCGGTCCAGGGAAATGGCTCTTGGGAGAGAGCCGTGCGCTAAAAG
TTGGCATTAATGCAGGCAGACTTCGCCTTGCCTTCTAAGAATAGTTTACCGGCGCAGCTTTTCCAGT
