Detailed information of TA system
Overview
TA module
| Type | VIII | Classification (family/domain) | SdsR-RyeA/- |
| Location | 2164893..2165044 | Replicon | chromosome |
| Accession | NZ_CP092635 | ||
| Organism | Enterobacter cloacae strain EFN743 | ||
Toxin (RNA)
| Gene name | SdsR | ||
| Locus tag | - | ||
| Coordinates | 2164928..2165031 (+) |
Antitoxin (RNA)
| Gene name | RyeA | ||
| Locus tag | - | ||
| Coordinates | 2164893..2165044 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKZ88_RS10610 (MKZ88_10610) | 2161377..2162039 | - | 663 | WP_013096100.1 | exodeoxyribonuclease X | - |
| MKZ88_RS10615 (MKZ88_10615) | 2162063..2162713 | - | 651 | WP_058650806.1 | carbon-nitrogen hydrolase family protein | - |
| MKZ88_RS10620 (MKZ88_10620) | 2162823..2163053 | - | 231 | WP_013096102.1 | DNA polymerase III subunit theta | - |
| MKZ88_RS10625 (MKZ88_10625) | 2163191..2163562 | + | 372 | WP_058650805.1 | CopC domain-containing protein YobA | - |
| MKZ88_RS10630 (MKZ88_10630) | 2163564..2164433 | + | 870 | WP_060578714.1 | copper homeostasis membrane protein CopD | - |
| MKZ88_RS10635 (MKZ88_10635) | 2164450..2164788 | + | 339 | WP_013096105.1 | YebY family protein | - |
| - | 2164893..2165044 | - | 152 | - | - | Antitoxin |
| - | 2164928..2165031 | + | 104 | - | - | Toxin |
| MKZ88_RS10640 (MKZ88_10640) | 2165195..2166136 | - | 942 | WP_058650803.1 | VirK/YbjX family protein | - |
| MKZ88_RS10645 (MKZ88_10645) | 2166303..2166947 | + | 645 | WP_023620457.1 | protein-serine/threonine phosphatase | - |
| MKZ88_RS10650 (MKZ88_10650) | 2166981..2167220 | - | 240 | WP_013096113.1 | YebV family protein | - |
| MKZ88_RS10655 (MKZ88_10655) | 2167326..2168768 | - | 1443 | WP_058650802.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 104 bp
>T236809 NZ_CP092635:2164928-2165031 [Enterobacter cloacae]
GGCAAGGCGACTTAGCCTGCATTAATGCCAACTTTTAGCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATAC
AGGAATCGTATTCGGTCTCTTTTT
GGCAAGGCGACTTAGCCTGCATTAATGCCAACTTTTAGCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATAC
AGGAATCGTATTCGGTCTCTTTTT
Antitoxin
Download Length: 152 bp
>AT236809 NZ_CP092635:c2165044-2164893 [Enterobacter cloacae]
CTTTCAATCAGATAAAAAGAGACCGAATACGATTCCTGTATTCGGTCCAGGGAAATGGCTCTTGGGAGAGAGCCGTGCGC
TAAAAGTTGGCATTAATGCAGGCTAAGTCGCCTTGCCTTTTAAGAATAGATGACGACGCCAGGTTTTCCAGT
CTTTCAATCAGATAAAAAGAGACCGAATACGATTCCTGTATTCGGTCCAGGGAAATGGCTCTTGGGAGAGAGCCGTGCGC
TAAAAGTTGGCATTAATGCAGGCTAAGTCGCCTTGCCTTTTAAGAATAGATGACGACGCCAGGTTTTCCAGT
