Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | bsrG-as-bsrH/- |
Location | 2232321..2232485 | Replicon | chromosome |
Accession | NZ_CP092369 | ||
Organism | Bacillus subtilis strain ZW |
Toxin (Protein)
Gene name | bsrG | Uniprot ID | L8EAY0 |
Locus tag | MID01_RS11390 | Protein ID | WP_009967548.1 |
Coordinates | 2232321..2232437 (+) | Length | 39 a.a. |
Antitoxin (RNA)
Gene name | as-bsrH | ||
Locus tag | - | ||
Coordinates | 2232432..2232485 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
MID01_RS11350 (2227458) | 2227458..2227850 | + | 393 | WP_019712881.1 | hypothetical protein | - |
MID01_RS11355 (2227871) | 2227871..2228122 | + | 252 | WP_019712880.1 | phage holin | - |
MID01_RS11360 (2228250) | 2228250..2229386 | + | 1137 | WP_019712879.1 | tetratricopeptide repeat protein | - |
MID01_RS11365 (2229376) | 2229376..2229552 | + | 177 | WP_019712878.1 | hypothetical protein | - |
MID01_RS11370 (2229595) | 2229595..2230823 | - | 1229 | Protein_2195 | UV damage repair protein UvrX | - |
MID01_RS11375 (2230816) | 2230816..2231148 | - | 333 | WP_109962767.1 | YolD-like family protein | - |
MID01_RS11380 (2231322) | 2231322..2231657 | + | 336 | WP_041054825.1 | hypothetical protein | - |
MID01_RS11385 (2231701) | 2231701..2232060 | - | 360 | WP_041338710.1 | hypothetical protein | - |
MID01_RS11390 (2232321) | 2232321..2232437 | + | 117 | WP_009967548.1 | type I toxin-antitoxin system toxin BsrG | Toxin |
- (2232432) | 2232432..2232485 | - | 54 | NuclAT_2 | - | Antitoxin |
- (2232432) | 2232432..2232485 | - | 54 | NuclAT_2 | - | Antitoxin |
- (2232432) | 2232432..2232485 | - | 54 | NuclAT_2 | - | Antitoxin |
- (2232432) | 2232432..2232485 | - | 54 | NuclAT_2 | - | Antitoxin |
MID01_RS11395 (2232529) | 2232529..2232987 | - | 459 | WP_109962768.1 | YrhA family protein | - |
MID01_RS11400 (2233000) | 2233000..2234886 | - | 1887 | WP_109962769.1 | T7SS effector LXG polymorphic toxin | - |
MID01_RS11405 (2235019) | 2235019..2235552 | - | 534 | WP_109962770.1 | SMI1/KNR4 family protein | - |
MID01_RS11410 (2235637) | 2235637..2235887 | - | 251 | Protein_2203 | hypothetical protein | - |
MID01_RS11415 (2236067) | 2236067..2236951 | + | 885 | WP_109962771.1 | endonuclease YokF | - |
MID01_RS11420 (2236994) | 2236994..2237467 | - | 474 | WP_109962772.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 2116127..2265019 | 148892 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 39 a.a. Molecular weight: 4336.39 Da Isoelectric Point: 10.1022
>T235981 WP_009967548.1 NZ_CP092369:2232321-2232437 [Bacillus subtilis]
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
Download Length: 117 bp
>T235981 NZ_LR134527:c1617584-1616991 [Bartonella elizabethae]
GTGGAGACGTATAAGGGGAGTGGTGATCCTTATACTGATCCTAAAACTGGTGTGATGTATAACCGGTTTGAAATTCAGGA
TAAAACCGTACTGGAGCGTGTAGAATCCACTTTCGCTTATGTAAGGTCTTTTGAGCTTATGCGTGCTGCTAGGGGTGGTA
AGTTTGATCTCAATCATATGAAAGATATTCACAAGAAGCTATTTGGTGACGTCTATGAATGGGCGGGAGAGATCCGTTCA
ATAGATATTACCAAAGGTGGTTGTTTATTTGCTTATCATCATCAGATTGAAAGTTATACGCCGAAGATTACACAGCAGCT
TGCCAAAGAACAATATCTGCGTGGTCTTGATGCGGATGAATTCAGCCAGAGAGCTGGATATTACATGGGTGAAATAAATG
CGTTGCATCCCTTTCGAGAGGGAAATGGACGCACTCAGCGTGAATTTATTGGTCAACTTGCTCGTGAGGCTGGTTATCAT
ATCAACTGGAAGGGTATCACGCGACAAGAAATGATAGAGGCATCAATTGAGGCACTTTATGGTACTTCTGAATTACTGTC
TGAGCTTATTCGTAAGAACCTCAATCTCTTATAA
GTGGAGACGTATAAGGGGAGTGGTGATCCTTATACTGATCCTAAAACTGGTGTGATGTATAACCGGTTTGAAATTCAGGA
TAAAACCGTACTGGAGCGTGTAGAATCCACTTTCGCTTATGTAAGGTCTTTTGAGCTTATGCGTGCTGCTAGGGGTGGTA
AGTTTGATCTCAATCATATGAAAGATATTCACAAGAAGCTATTTGGTGACGTCTATGAATGGGCGGGAGAGATCCGTTCA
ATAGATATTACCAAAGGTGGTTGTTTATTTGCTTATCATCATCAGATTGAAAGTTATACGCCGAAGATTACACAGCAGCT
TGCCAAAGAACAATATCTGCGTGGTCTTGATGCGGATGAATTCAGCCAGAGAGCTGGATATTACATGGGTGAAATAAATG
CGTTGCATCCCTTTCGAGAGGGAAATGGACGCACTCAGCGTGAATTTATTGGTCAACTTGCTCGTGAGGCTGGTTATCAT
ATCAACTGGAAGGGTATCACGCGACAAGAAATGATAGAGGCATCAATTGAGGCACTTTATGGTACTTCTGAATTACTGTC
TGAGCTTATTCGTAAGAACCTCAATCTCTTATAA
Antitoxin
Download Length: 54 bp
>AT235981 NZ_CP092369:c2232485-2232432 [Bacillus subtilis]
AAATCTGCGTAGGCCTAACCCTTCAGGTGTCCAAACTCAAGGGAAGGTCTATTT
AAATCTGCGTAGGCCTAACCCTTCAGGTGTCCAAACTCAAGGGAAGGTCTATTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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