Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | /RES-TIGR02293 |
| Location | 271271..272172 | Replicon | plasmid p60214CZ_VIM |
| Accession | NZ_CP085747 | ||
| Organism | Enterobacter hormaechei strain 60214CZ | ||
Toxin (Protein)
| Gene name | - | Uniprot ID | A0A7W3ICT5 |
| Locus tag | LJU47_RS24890 | Protein ID | WP_058658228.1 |
| Coordinates | 271271..271729 (-) | Length | 153 a.a. |
Antitoxin (Protein)
| Gene name | - | Uniprot ID | - |
| Locus tag | LJU47_RS24895 | Protein ID | WP_022652121.1 |
| Coordinates | 271726..272172 (-) | Length | 149 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJU47_RS24865 (LJU47_24865) | 268487..268933 | - | 447 | WP_015063027.1 | hypothetical protein | - |
| LJU47_RS24870 (LJU47_24870) | 268980..269786 | - | 807 | WP_015063028.1 | hypothetical protein | - |
| LJU47_RS24875 (LJU47_24875) | 270016..270279 | - | 264 | WP_058658227.1 | hypothetical protein | - |
| LJU47_RS24880 (LJU47_24880) | 270336..270668 | - | 333 | WP_022652118.1 | hypothetical protein | - |
| LJU47_RS24885 (LJU47_24885) | 271003..271233 | - | 231 | WP_022652119.1 | hypothetical protein | - |
| LJU47_RS24890 (LJU47_24890) | 271271..271729 | - | 459 | WP_058658228.1 | RES family NAD+ phosphorylase | Toxin |
| LJU47_RS24895 (LJU47_24895) | 271726..272172 | - | 447 | WP_022652121.1 | DUF2384 domain-containing protein | Antitoxin |
| LJU47_RS24900 (LJU47_24900) | 272249..272557 | - | 309 | WP_022652122.1 | hypothetical protein | - |
| LJU47_RS24905 (LJU47_24905) | 272733..273473 | - | 741 | WP_227793215.1 | DNA methyltransferase | - |
| LJU47_RS24910 (LJU47_24910) | 273458..274000 | - | 543 | WP_227793216.1 | winged helix-turn-helix domain-containing protein | - |
| LJU47_RS24915 (LJU47_24915) | 273987..274598 | - | 612 | WP_022652124.1 | hypothetical protein | - |
| LJU47_RS24920 (LJU47_24920) | 274660..275295 | - | 636 | WP_015063032.1 | hypothetical protein | - |
| LJU47_RS24925 (LJU47_24925) | 275785..276126 | - | 342 | WP_015063033.1 | TA system toxin CbtA family protein | - |
| LJU47_RS24930 (LJU47_24930) | 276147..276464 | - | 318 | WP_015063034.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| LJU47_RS24935 (LJU47_24935) | 276483..276704 | - | 222 | WP_015063035.1 | DUF987 domain-containing protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Conjugative plasmid | ant(3'')-Ia / dfrA1 / aph(3')-Ia / blaVIM-1 / qacE / sul1 / tet(A) | - | 1..311760 | 311760 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 153 a.a. Molecular weight: 16742.14 Da Isoelectric Point: 4.4843
>T221182 WP_058658228.1 NZ_CP085747:c271729-271271 [Enterobacter hormaechei]
VILYRMTKTRYITTAWSGLGAKEAGGRWNSVGTALVYLSETASLTMLETLVHINAPQLLDAYTLLSIDVPDDQIQAFDLN
LLPPGWASEDAPAELALYGDNWAESGSSVALRIPSALSPVEFNYLLNPAHPAIFDLMKTVQKIPYQFDTRLK
VILYRMTKTRYITTAWSGLGAKEAGGRWNSVGTALVYLSETASLTMLETLVHINAPQLLDAYTLLSIDVPDDQIQAFDLN
LLPPGWASEDAPAELALYGDNWAESGSSVALRIPSALSPVEFNYLLNPAHPAIFDLMKTVQKIPYQFDTRLK
Download Length: 459 bp
>T221182 NZ_CP117356:c12129-11701 [Salmonella enterica subsp. enterica serovar Dublin]
ATGAAACAGCCACGTACGAAGACCTATATGCTCGATACCTGTATCTGTTCGTTCATCATGCGCGAGCAGTCGGAAGCGGT
GCTGAAGCGCCTTGAGCAGGCGGTGCTGCGCGGCCACCGTATCGTGATCTCGGCCATCACCTACTCCGAGATGCGCTTCG
GCGCCACCGGACCTAAGGCCTCGCCGCGTCTCGTCCAGCTGGTCGACGCGTTCTGCGCCCGCCTCGATGCCATCCTGCCC
TGGGATCGCGCTGCGGTAGACGCCACCACGGAGATTAAGGTGGCACTGTGCCTCGCCGGGACGCCGATCGGTCCGAACGA
CACGGCGATTGCCGGGCATGCCATCGCCGCCGGTGCCGTGCTGGTGACGAATAATACGCGGGAATTTGAGCGGGTACCGG
GCCTGGTACTGGAAGACTGGGTAAGTTAA
ATGAAACAGCCACGTACGAAGACCTATATGCTCGATACCTGTATCTGTTCGTTCATCATGCGCGAGCAGTCGGAAGCGGT
GCTGAAGCGCCTTGAGCAGGCGGTGCTGCGCGGCCACCGTATCGTGATCTCGGCCATCACCTACTCCGAGATGCGCTTCG
GCGCCACCGGACCTAAGGCCTCGCCGCGTCTCGTCCAGCTGGTCGACGCGTTCTGCGCCCGCCTCGATGCCATCCTGCCC
TGGGATCGCGCTGCGGTAGACGCCACCACGGAGATTAAGGTGGCACTGTGCCTCGCCGGGACGCCGATCGGTCCGAACGA
CACGGCGATTGCCGGGCATGCCATCGCCGCCGGTGCCGTGCTGGTGACGAATAATACGCGGGAATTTGAGCGGGTACCGG
GCCTGGTACTGGAAGACTGGGTAAGTTAA
Antitoxin
Download Length: 149 a.a. Molecular weight: 16606.03 Da Isoelectric Point: 7.4048
>AT221182 WP_022652121.1 NZ_CP085747:c272172-271726 [Enterobacter hormaechei]
MTMKVFSPDLSKMNPHGLWQVVGLDNDGIALMDKISHGLEGKVAHSISEWANITPSELRKMSGIPNTTFNRSVKARFTAD
QSERLVRIIRVIERAVELFEGDKEAAQKWMNEPNRGLSWKTPADVVSSETGALEVMRLITRIEHGVYS
MTMKVFSPDLSKMNPHGLWQVVGLDNDGIALMDKISHGLEGKVAHSISEWANITPSELRKMSGIPNTTFNRSVKARFTAD
QSERLVRIIRVIERAVELFEGDKEAAQKWMNEPNRGLSWKTPADVVSSETGALEVMRLITRIEHGVYS
Download Length: 447 bp
>AT221182 NZ_CP117356:c12356-12126 [Salmonella enterica subsp. enterica serovar Dublin]
ATGAGAACCGTATCCATTTTTAAAAACGGCAACAACCGCGCCATCCGCCTTCCACGCGATCTGGATTTTGAGGGGGTGAG
CGAGCTGGAAATCGTCCGGGAAGGGGACAGCATCATCCTGCGCCCTGTCCGGCCGACCTGGGGCTCGTTCGCGCAGCTCG
AAAAAGCTGACCCGGACTTTATGGCGGAGCGCGAGGACGTTGTCAGCGACGAAGGACGCTTTGAGCTATGA
ATGAGAACCGTATCCATTTTTAAAAACGGCAACAACCGCGCCATCCGCCTTCCACGCGATCTGGATTTTGAGGGGGTGAG
CGAGCTGGAAATCGTCCGGGAAGGGGACAGCATCATCCTGCGCCCTGTCCGGCCGACCTGGGGCTCGTTCGCGCAGCTCG
AAAAAGCTGACCCGGACTTTATGGCGGAGCGCGAGGACGTTGTCAGCGACGAAGGACGCTTTGAGCTATGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|