Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | mqsRA (relBE)/MqsR-MqsA |
| Location | 4051572..4052265 | Replicon | chromosome |
| Accession | NZ_CP083481 | ||
| Organism | Escherichia coli strain elppa9 | ||
Toxin (Protein)
| Gene name | mqsR | Uniprot ID | S1EZG2 |
| Locus tag | K9U12_RS19700 | Protein ID | WP_000415584.1 |
| Coordinates | 4051572..4051868 (+) | Length | 99 a.a. |
Antitoxin (Protein)
| Gene name | mqsA | Uniprot ID | S1EBV2 |
| Locus tag | K9U12_RS19705 | Protein ID | WP_000650107.1 |
| Coordinates | 4051870..4052265 (+) | Length | 132 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K9U12_RS19665 (4046660) | 4046660..4046974 | - | 315 | WP_000958598.1 | putative quinol monooxygenase | - |
| K9U12_RS19670 (4047005) | 4047005..4047586 | - | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| K9U12_RS19675 (4047905) | 4047905..4048237 | + | 333 | WP_023149630.1 | DUF2645 family protein | - |
| K9U12_RS19680 (4048283) | 4048283..4049632 | - | 1350 | WP_000673402.1 | quorum sensing histidine kinase QseC | - |
| K9U12_RS19685 (4049629) | 4049629..4050288 | - | 660 | WP_001221493.1 | quorum sensing response regulator transcription factor QseB | - |
| K9U12_RS19690 (4050440) | 4050440..4050832 | + | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| K9U12_RS19695 (4050885) | 4050885..4051367 | + | 483 | WP_000183505.1 | GyrI-like domain-containing protein | - |
| K9U12_RS19700 (4051572) | 4051572..4051868 | + | 297 | WP_000415584.1 | type II toxin-antitoxin system toxin MqsR | Toxin |
| K9U12_RS19705 (4051870) | 4051870..4052265 | + | 396 | WP_000650107.1 | type II toxin-antitoxin system antitoxin MqsA | Antitoxin |
| K9U12_RS19710 (4052398) | 4052398..4054005 | + | 1608 | WP_001295629.1 | ABC transporter substrate-binding protein | - |
| K9U12_RS19715 (4054143) | 4054143..4056401 | + | 2259 | WP_001281841.1 | DNA topoisomerase IV subunit A | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 99 a.a. Molecular weight: 11231.96 Da Isoelectric Point: 8.9070
>T216541 WP_000415584.1 NZ_CP083481:4051572-4051868 [Escherichia coli]
MEKRTPHTRLSQVKKLVNAGQVRTTRSALLNADELGLDFDGMCNVIIGLSESDFYKSMTTYSDHTIWQDVYRPRLVTGQV
YLKITVIHDVLIVSFKEK
MEKRTPHTRLSQVKKLVNAGQVRTTRSALLNADELGLDFDGMCNVIIGLSESDFYKSMTTYSDHTIWQDVYRPRLVTGQV
YLKITVIHDVLIVSFKEK
Download Length: 297 bp
>T216541 NZ_CP113116:c4911672-4911094 [Mycobacterium sp. Aquia_213]
ATGAACCGGCTCGACCTTGTCGTCGGGCCCAACGGAGCCGGTAAATCAACCTTCGTCGAATTCACGCTCGCGCCGCTGCT
GCCGACAAGCGTCTTCGTCAACGCCGACGAGATCGCCAGACAGCGCTGGCCTGCCGACGCTGCTGCCCATTCCTACGAGG
CCGCGCGGATTGCGGCCGGTACCAGGGCGAGGCTGATCGAACTGCGCCGATCGTTCATCGCCGAAACGGTGTTTTCTCAC
CCGTCCAAACTCGAGCTGATCGACAGCGCGCACGCGGCGTCCTACACCGTCGTCCTGCACGTGTTGCTCATTCCCGAGAA
GCTGGCCGTGGAGCGGGTCAAGCATCGGGTCGCCGCCGGCGGGCACGATGTCCCCGAAGCCAAGATTCGTCAACGCTACC
AACGGCTTTGGCCACTGGTTGTCACCGCCGTCGCACGCTGCGACTCCGCCACCGTGTACGACAACAGTGCGCTCAAAGGC
CCGCGCATCGTCGCCCAAATGAGTTTCGGCCAGCCGGACGGGACACCCACGTGGCCGGCGTGGACACCCCGCGAGTTGAC
GTCGCGCTGGCCCGCATAA
ATGAACCGGCTCGACCTTGTCGTCGGGCCCAACGGAGCCGGTAAATCAACCTTCGTCGAATTCACGCTCGCGCCGCTGCT
GCCGACAAGCGTCTTCGTCAACGCCGACGAGATCGCCAGACAGCGCTGGCCTGCCGACGCTGCTGCCCATTCCTACGAGG
CCGCGCGGATTGCGGCCGGTACCAGGGCGAGGCTGATCGAACTGCGCCGATCGTTCATCGCCGAAACGGTGTTTTCTCAC
CCGTCCAAACTCGAGCTGATCGACAGCGCGCACGCGGCGTCCTACACCGTCGTCCTGCACGTGTTGCTCATTCCCGAGAA
GCTGGCCGTGGAGCGGGTCAAGCATCGGGTCGCCGCCGGCGGGCACGATGTCCCCGAAGCCAAGATTCGTCAACGCTACC
AACGGCTTTGGCCACTGGTTGTCACCGCCGTCGCACGCTGCGACTCCGCCACCGTGTACGACAACAGTGCGCTCAAAGGC
CCGCGCATCGTCGCCCAAATGAGTTTCGGCCAGCCGGACGGGACACCCACGTGGCCGGCGTGGACACCCCGCGAGTTGAC
GTCGCGCTGGCCCGCATAA
Antitoxin
Download Length: 132 a.a. Molecular weight: 14703.10 Da Isoelectric Point: 9.2136
>AT216541 WP_000650107.1 NZ_CP083481:4051870-4052265 [Escherichia coli]
MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKK
LSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR
MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKK
LSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR
Download Length: 396 bp
>AT216541 NZ_CP113116:c4912097-4911669 [Mycobacterium sp. Aquia_213]
ATGGCTGACAGCGCGGATCGAGTTACCCGGTTCGCCGCGGACCTCGTCGACAGTGCGAAGGCCGAGGGCGCGCGGCAGAG
CCGATCGGCCAAGCAGCAACTGGATCACTGGGCGCGGGTGGGGCGCGCGGTGTCGAGCCAGCACTCCGCTGCACGTCGCC
GGGTGGAGGCGGCGCTGGCCGGGGATTTGGAACTGGGCGAATTGAGTGTCGAAGAAGGTGTCGTCTTCAACGCCGAAATC
GCCGCGGCGATCCAGGAAAACCTCAACCAGGCCAACTACGGCAAGCTGCTGGCCAAGCGTGGCGTCACCACCGTTGCCCT
TAACGAGGCCGGCGAGATCGTCGAACACCGGCCCGATGGCAGTTCGACCGTGTTGACGGCGAACTCGCGACCCGCACGGC
GCAAGAAGGTGAACGCCGGGGCCCGATGA
ATGGCTGACAGCGCGGATCGAGTTACCCGGTTCGCCGCGGACCTCGTCGACAGTGCGAAGGCCGAGGGCGCGCGGCAGAG
CCGATCGGCCAAGCAGCAACTGGATCACTGGGCGCGGGTGGGGCGCGCGGTGTCGAGCCAGCACTCCGCTGCACGTCGCC
GGGTGGAGGCGGCGCTGGCCGGGGATTTGGAACTGGGCGAATTGAGTGTCGAAGAAGGTGTCGTCTTCAACGCCGAAATC
GCCGCGGCGATCCAGGAAAACCTCAACCAGGCCAACTACGGCAAGCTGCTGGCCAAGCGTGGCGTCACCACCGTTGCCCT
TAACGAGGCCGGCGAGATCGTCGAACACCGGCCCGATGGCAGTTCGACCGTGTTGACGGCGAACTCGCGACCCGCACGGC
GCAAGAAGGTGAACGCCGGGGCCCGATGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|