210146

Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) hipBA/HipA-HipB
Location 2773646..2775234 Replicon chromosome
Accession NZ_CP079807
Organism Klebsiella pneumoniae subsp. pneumoniae strain WRC02_S465MC

Toxin (Protein)


Gene name hipA Uniprot ID -
Locus tag KWL80_RS13715 Protein ID WP_064162061.1
Coordinates 2773646..2774968 (-) Length 441 a.a.

Antitoxin (Protein)


Gene name hipB Uniprot ID A0A0H3GXD8
Locus tag KWL80_RS13720 Protein ID WP_002904790.1
Coordinates 2774968..2775234 (-) Length 89 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KWL80_RS13700 (2768702) 2768702..2771203 + 2502 WP_064162059.1 fimbria/pilus outer membrane usher protein -
KWL80_RS13705 (2771191) 2771191..2772195 + 1005 WP_064162060.1 fimbrial protein -
KWL80_RS13710 (2772337) 2772337..2773629 + 1293 WP_002904794.1 glycoside hydrolase family 10 protein -
KWL80_RS13715 (2773646) 2773646..2774968 - 1323 WP_064162061.1 type II toxin-antitoxin system HipA family toxin Toxin
KWL80_RS13720 (2774968) 2774968..2775234 - 267 WP_002904790.1 type II toxin-antitoxin system antitoxin HipB Antitoxin
KWL80_RS13725 (2775500) 2775500..2775826 - 327 WP_064162062.1 hydroxyisourate hydrolase -
KWL80_RS13730 (2775823) 2775823..2776323 - 501 WP_064162063.1 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase -
KWL80_RS13735 (2776301) 2776301..2777680 - 1380 WP_040245186.1 nucleobase:cation symporter-2 family protein -
KWL80_RS13740 (2778026) 2778026..2779180 + 1155 WP_002904783.1 FAD-dependent urate hydroxylase HpxO -
KWL80_RS13745 (2779161) 2779161..2780084 - 924 WP_002904781.1 LysR family hpxDE operon transcriptional regulator HpxR -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(4-103)

Antitoxin

(16-65)


Sequences


Toxin        


Download         Length: 441 a.a.        Molecular weight: 49155.46 Da        Isoelectric Point: 7.5357

>T210146 WP_064162061.1 NZ_CP079807:c2774968-2773646 [Klebsiella pneumoniae subsp. pneumoniae]
MATLTTWMNNVRVGTLTRQANGAHSFRYDEEWLRSPRARPLSLSLPLQYGNITADAVYHYFDNLLPDSPQVRDRIVRRYQ
ARSKQPFDLLAEVGRDSVGAVTLLPPGEEAHLEGLRWQTLDEAQLTALLTAYQSDIPLGMITSQDDFRISVAGAQEKTAL
LRMGEQWCIPQGATPTTHIIKLPIGEIKQPNATLDLRESVDNEYLCLALARELGLAVPEAEIIATPRIRALAVTRFDRRW
AQEGRVLLRLPQEDLCQAFGLPSAMKYESDGGPGIAAIMTFLLGSSEALKDRYDFMKFMVFQWLTGATDGHAKNFSIYLL
PGGSYRLTPFYDIISAFPVLGGTGLHLRDLKLSMGLNATKGRKTEINAIYPRHFLATAKAVNFPREQMLAILQEFAGHVP
QAIESARRTLPADFSTHVWQAITENMLKLHARLQQGLQAL

Download         Length: 1323 bp

>T210146 NZ_CP104442:c932471-932193 [Escherichia coli]
ATGATTCAAAGGGATATTGAATACTCGGGACAATTTTCAAAGGATGTAAAACTTGCACAAAAGCGTCATAAGGATATGAA
TAAATTGAAATATCTTATGACGCTTCTTATCAATAATGCTTTACCGCTTCCAGCTGTTTATAAAGACCACCCGCTGCAAG
GTTCATGGAAAGGTTATCGCGATGCTCATGTCGAACCGGACTGGATCCTGATTTACAAACTTACCGATAAACTTTTACGA
TTTGAGAGAACTGGAACTCACGCGGCGCTCTTTGGGTAA

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9906.27 Da        Isoelectric Point: 8.5912

>AT210146 WP_002904790.1 NZ_CP079807:c2775234-2774968 [Klebsiella pneumoniae subsp. pneumoniae]
MNSPQIYSPVQLANYLKLLRQQNHWTQDALARRIGIKQATLSNFENHPDKTTLTTLFKILQSLGVVMTLNAKAAETAPAP
DNNTDLDW

Download         Length: 267 bp

>AT210146 NZ_CP104442:c932734-932474 [Escherichia coli]
ATGGCTGCTAACGCATTTGTTCGCGCCCGAATCGATGAAGATCTGAAGAATCAGGCGGCGGACGTACTGGCCGGGATGGG
GCTGACCATCTCTGACCTGGTTCGCATAACCCTCACAAAGGTCGCGCGTGAAAAGGCATTGCCGTTTGATTTACGCGAGC
CTAATCAATTAACCATTCAATCAATCAAAAACAGCGAAGCTGGCGTTGATGTTCATAAGGCCAAAGACGCCGATGATTTA
TTTGATAAATTAGGAATTTAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GXD8

References