Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/ParE-DnaT |
| Location | 18416..18938 | Replicon | plasmid pCFSAN051827_2 |
| Accession | NZ_CP075124 | ||
| Organism | Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN051827 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | A9LK42 |
| Locus tag | BCA48_RS23130 | Protein ID | WP_000220562.1 |
| Coordinates | 18657..18938 (+) | Length | 94 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | G3CAG1 |
| Locus tag | BCA48_RS23125 | Protein ID | WP_000121743.1 |
| Coordinates | 18416..18667 (+) | Length | 84 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCA48_RS23090 (BCA48_23095) | 13625..13936 | + | 312 | WP_000360321.1 | hypothetical protein | - |
| BCA48_RS23095 (BCA48_23100) | 13974..14594 | + | 621 | WP_012477163.1 | hypothetical protein | - |
| BCA48_RS23100 (BCA48_23105) | 14619..15254 | + | 636 | WP_012477164.1 | hypothetical protein | - |
| BCA48_RS23105 (BCA48_23110) | 15285..15638 | - | 354 | WP_000876434.1 | DNA distortion polypeptide 3 | - |
| BCA48_RS23110 (BCA48_23115) | 15744..16190 | - | 447 | WP_001074382.1 | hypothetical protein | - |
| BCA48_RS23115 (BCA48_23120) | 16230..17066 | - | 837 | WP_001802123.1 | replication initiation protein | - |
| BCA48_RS23120 (BCA48_23125) | 17395..17631 | + | 237 | WP_220572326.1 | hypothetical protein | - |
| BCA48_RS23510 | 18193..18324 | - | 132 | WP_001378418.1 | hypothetical protein | - |
| BCA48_RS23125 (BCA48_23130) | 18416..18667 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin |
| BCA48_RS23130 (BCA48_23135) | 18657..18938 | + | 282 | WP_000220562.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| BCA48_RS23135 (BCA48_23140) | 19084..19407 | + | 324 | WP_001181905.1 | hypothetical protein | - |
| BCA48_RS23140 (BCA48_23145) | 19455..19700 | + | 246 | WP_000356542.1 | hypothetical protein | - |
| BCA48_RS23145 (BCA48_23150) | 19690..19905 | + | 216 | WP_001180117.1 | hypothetical protein | - |
| BCA48_RS23150 (BCA48_23155) | 19998..20327 | + | 330 | WP_000866654.1 | hypothetical protein | - |
| BCA48_RS23155 (BCA48_23160) | 20369..20548 | + | 180 | WP_000439079.1 | hypothetical protein | - |
| BCA48_RS23160 (BCA48_23165) | 20618..20767 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| BCA48_RS23165 (BCA48_23170) | 20780..21052 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| BCA48_RS23175 (BCA48_23180) | 21378..21923 | + | 546 | WP_020801480.1 | DNA distortion polypeptide 1 | - |
| BCA48_RS23180 (BCA48_23185) | 21926..23092 | + | 1167 | WP_012477147.1 | MobP1 family relaxase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Non-Mobilizable plasmid | - | - | 1..33067 | 33067 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 94 a.a. Molecular weight: 11021.83 Da Isoelectric Point: 10.5938
>T203077 WP_000220562.1 NZ_CP075124:18657-18938 [Salmonella enterica subsp. enterica serovar Enteritidis]
MTYELAFDRRALKEWQKLGHTIREQFKKKLAERLENPRVPAARLHGHADRYKIKLRASGYRLVYQVIDEKVVLLVISVGR
RESSEVYQIADLR
MTYELAFDRRALKEWQKLGHTIREQFKKKLAERLENPRVPAARLHGHADRYKIKLRASGYRLVYQVIDEKVVLLVISVGR
RESSEVYQIADLR
Download Length: 282 bp
>T203077 NZ_CP099874:2416718-2417104 [Escherichia albertii]
ATGATTTGGGTCAGTGCACAGGAGGTCATTGCCTTCCACGATCGAATTTTGCAACGTTTTCCCGGTGTGGCGGGCCTGAC
TGACCCCGGCAGAGCACAGGCGTTGATTTATCGCGTGCAGAATCGTGTTCACTACGAGGGCGTTACTGACCTGTTTGAAC
TGGCAGCAACCTACTGGGTTGCCATCGCTCGCGGTCACATCTTTCATGATGGTAATAAACGTACCGCATTTTTCGTTACT
ATGACCTTTCTTTGGCGCAATGGCATCCGTATCCGTGACGTTGATAACTCGCTGGAGAACCTGACTGTCGAAGCGGCTAC
CGGAGAAAAAACGGTCGGTCAATTAGCGCGATGTTTACGTGAACGAGTGGATAGTTCCGGGAATTAA
ATGATTTGGGTCAGTGCACAGGAGGTCATTGCCTTCCACGATCGAATTTTGCAACGTTTTCCCGGTGTGGCGGGCCTGAC
TGACCCCGGCAGAGCACAGGCGTTGATTTATCGCGTGCAGAATCGTGTTCACTACGAGGGCGTTACTGACCTGTTTGAAC
TGGCAGCAACCTACTGGGTTGCCATCGCTCGCGGTCACATCTTTCATGATGGTAATAAACGTACCGCATTTTTCGTTACT
ATGACCTTTCTTTGGCGCAATGGCATCCGTATCCGTGACGTTGATAACTCGCTGGAGAACCTGACTGTCGAAGCGGCTAC
CGGAGAAAAAACGGTCGGTCAATTAGCGCGATGTTTACGTGAACGAGTGGATAGTTCCGGGAATTAA
Antitoxin
Download Length: 84 a.a. Molecular weight: 9194.43 Da Isoelectric Point: 4.1683
>AT203077 WP_000121743.1 NZ_CP075124:18416-18667 [Salmonella enterica subsp. enterica serovar Enteritidis]
MSYQILTTTAASITDLKKNPMGTVAEGEGDAVAILNRNEPAFYCVPPKLYAYYRELAEDAELNAVADERMKNPEIVKVNL
DDL
MSYQILTTTAASITDLKKNPMGTVAEGEGDAVAILNRNEPAFYCVPPKLYAYYRELAEDAELNAVADERMKNPEIVKVNL
DDL
Download Length: 252 bp
>AT203077 NZ_CP099874:2416500-2416721 [Escherichia albertii]
ATGCAAACTTACACTTCCACACAAGCCAGAGCCAATATTGCCACTGTACTGGATACCGCGTTGAATGGTGAGCCAGTTGA
AATCACCCGTCGCGACGGCAGCTCTGCCGTGCTCATTAGTAAAGCCGCATTCGAGGCGTATCAAAATGCGAAACTGGACG
CGGAATTTGATGCCATCATGCAACGTCATGAACACACAATTGAAGCGTTGACTGATCGATGA
ATGCAAACTTACACTTCCACACAAGCCAGAGCCAATATTGCCACTGTACTGGATACCGCGTTGAATGGTGAGCCAGTTGA
AATCACCCGTCGCGACGGCAGCTCTGCCGTGCTCATTAGTAAAGCCGCATTCGAGGCGTATCAAAATGCGAAACTGGACG
CGGAATTTGATGCCATCATGCAACGTCATGAACACACAATTGAAGCGTTGACTGATCGATGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
Structures
Toxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A9LK42 |
Antitoxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A3S5I301 |