Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | mazEF/MazF(toxin) |
| Location | 508135..508772 | Replicon | chromosome |
| Accession | NZ_CP074685 | ||
| Organism | Bacillus velezensis strain VTX9 | ||
Toxin (Protein)
| Gene name | mazF | Uniprot ID | G4NU33 |
| Locus tag | KH263_RS02435 | Protein ID | WP_003156187.1 |
| Coordinates | 508422..508772 (+) | Length | 117 a.a. |
Antitoxin (Protein)
| Gene name | mazE | Uniprot ID | I2HMS5 |
| Locus tag | KH263_RS02430 | Protein ID | WP_003156188.1 |
| Coordinates | 508135..508416 (+) | Length | 94 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KH263_RS02410 (KH263_02410) | 504500..505099 | - | 600 | WP_003156193.1 | rhomboid family intramembrane serine protease | - |
| KH263_RS02415 (KH263_02415) | 505192..505557 | + | 366 | WP_014304402.1 | holo-ACP synthase | - |
| KH263_RS02420 (KH263_02420) | 505722..506729 | + | 1008 | WP_003156191.1 | outer membrane lipoprotein carrier protein LolA | - |
| KH263_RS02425 (KH263_02425) | 506846..508015 | + | 1170 | WP_003156189.1 | alanine racemase | - |
| KH263_RS02430 (KH263_02430) | 508135..508416 | + | 282 | WP_003156188.1 | type II toxin-antitoxin system antitoxin EndoAI | Antitoxin |
| KH263_RS02435 (KH263_02435) | 508422..508772 | + | 351 | WP_003156187.1 | type II toxin-antitoxin system endoribonuclease NdoA | Toxin |
| KH263_RS02440 (KH263_02440) | 508890..509711 | + | 822 | WP_014304404.1 | STAS domain-containing protein | - |
| KH263_RS02445 (KH263_02445) | 509716..510081 | + | 366 | WP_003156180.1 | RsbT antagonist protein RsbS | - |
| KH263_RS02450 (KH263_02450) | 510084..510485 | + | 402 | WP_003156178.1 | anti-sigma regulatory factor | - |
| KH263_RS02455 (KH263_02455) | 510497..511504 | + | 1008 | WP_003156177.1 | PP2C family protein-serine/threonine phosphatase | - |
| KH263_RS02460 (KH263_02460) | 511568..511897 | + | 330 | WP_003156176.1 | anti-sigma factor antagonist RsbV | - |
| KH263_RS02465 (KH263_02465) | 511894..512376 | + | 483 | WP_003156173.1 | anti-sigma B factor RsbW | - |
| KH263_RS02470 (KH263_02470) | 512342..513130 | + | 789 | WP_003156171.1 | RNA polymerase sigma factor SigB | - |
| KH263_RS02475 (KH263_02475) | 513130..513732 | + | 603 | WP_003156170.1 | PP2C family serine/threonine-protein phosphatase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 117 a.a. Molecular weight: 12977.98 Da Isoelectric Point: 4.8781
>T202654 WP_003156187.1 NZ_CP074685:508422-508772 [Bacillus velezensis]
MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTAIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQI
RTIDKQRLTDKITHLDDEMMDKVDEALQISLALIDF
MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTAIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQI
RTIDKQRLTDKITHLDDEMMDKVDEALQISLALIDF
Download Length: 351 bp
>T202654 NZ_CP099575:c5957027-5956800 [Pseudomonas kermanshahensis]
ATGCGCAGTCGTGAAGTAATTCAGCTTATCGAGGCAGATGGGTGGTACGAAGTAGAGGTGAAGGGCAGCCATCACCAGTT
CAGGCACCCAACCAAAAGGGGGAGGGTGACGGTTCCCCACCCTAAGAGCGATCTGCCTAAGGGCACTGTACATAGCATCT
TGAAGCAAGCTGGGCTGAAGCAGCCTAATGGCTCCAACAGCTCAAGTACCAGTGGAGACACGCAATGA
ATGCGCAGTCGTGAAGTAATTCAGCTTATCGAGGCAGATGGGTGGTACGAAGTAGAGGTGAAGGGCAGCCATCACCAGTT
CAGGCACCCAACCAAAAGGGGGAGGGTGACGGTTCCCCACCCTAAGAGCGATCTGCCTAAGGGCACTGTACATAGCATCT
TGAAGCAAGCTGGGCTGAAGCAGCCTAATGGCTCCAACAGCTCAAGTACCAGTGGAGACACGCAATGA
Antitoxin
Download Length: 94 a.a. Molecular weight: 10562.92 Da Isoelectric Point: 6.4706
>AT202654 WP_003156188.1 NZ_CP074685:508135-508416 [Bacillus velezensis]
MSESSARTEMKISLPENLVAELDGVAMREKRSRNELISQAVRAYVSERTTRHNRDLMRRGYMEMAKINLNISSEAHYAEC
EAETTVERLVSGG
MSESSARTEMKISLPENLVAELDGVAMREKRSRNELISQAVRAYVSERTTRHNRDLMRRGYMEMAKINLNISSEAHYAEC
EAETTVERLVSGG
Download Length: 282 bp
>AT202654 NZ_CP099575:c5956803-5956396 [Pseudomonas kermanshahensis]
ATGAAATTTCCGGTCGTATTGCACAAAGACGCTGATTCGGACTACGGGGTGACCGTTCCTGATGTTCCTGGCTGCTTTTC
AGCAGGCGCCAGTGTCTCTCAGGCGTTGGAGAATGTTCAGGAGGCACTGGCGTTACATTTTGAAGGTCTGGTTGCCGATA
ACGAAGCGTTACCGCAGGCGCAAGAGATCGATGTTCATGTGGCTAACCCCGATTACCAAGGTGGGGTCTGGGCGGTCGTG
GACTTCGATGTGACCCCCTACCTTGGCAAGGCAGTGCGATTCAATGCGACGCTGCCGGAAAATTTGTTGCAACGGATCGA
TGAGAAGGTAAAGCGCGACCATAGGTATGCATCGCGTTCCGGATTTTTAGCATCGGCAGCGTTGCGAGAGCTGGCAATCG
CACACTGA
ATGAAATTTCCGGTCGTATTGCACAAAGACGCTGATTCGGACTACGGGGTGACCGTTCCTGATGTTCCTGGCTGCTTTTC
AGCAGGCGCCAGTGTCTCTCAGGCGTTGGAGAATGTTCAGGAGGCACTGGCGTTACATTTTGAAGGTCTGGTTGCCGATA
ACGAAGCGTTACCGCAGGCGCAAGAGATCGATGTTCATGTGGCTAACCCCGATTACCAAGGTGGGGTCTGGGCGGTCGTG
GACTTCGATGTGACCCCCTACCTTGGCAAGGCAGTGCGATTCAATGCGACGCTGCCGGAAAATTTGTTGCAACGGATCGA
TGAGAAGGTAAAGCGCGACCATAGGTATGCATCGCGTTCCGGATTTTTAGCATCGGCAGCGTTGCGAGAGCTGGCAATCG
CACACTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|