Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | mosAT/AbiEii-AbiEi |
| Location | 4888452..4890133 | Replicon | chromosome |
| Accession | NZ_CP071080 | ||
| Organism | Klebsiella pneumoniae strain 3347684I | ||
Toxin (Protein)
| Gene name | mosT | Uniprot ID | J2XCI1 |
| Locus tag | JY393_RS23590 | Protein ID | WP_004146663.1 |
| Coordinates | 4888452..4889369 (-) | Length | 306 a.a. |
Antitoxin (Protein)
| Gene name | mosA | Uniprot ID | A6TH05 |
| Locus tag | JY393_RS23595 | Protein ID | WP_004177809.1 |
| Coordinates | 4889375..4890133 (-) | Length | 253 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JY393_RS23570 (4883758) | 4883758..4885278 | + | 1521 | WP_004210021.1 | sugar ABC transporter ATP-binding protein | - |
| JY393_RS23575 (4885275) | 4885275..4886273 | + | 999 | WP_002885172.1 | ribose ABC transporter permease | - |
| JY393_RS23580 (4886304) | 4886304..4887245 | + | 942 | WP_002885156.1 | ABC transporter substrate-binding protein | - |
| JY393_RS23585 (4887320) | 4887320..4888327 | + | 1008 | WP_004177805.1 | carbohydrate kinase family protein | - |
| JY393_RS23590 (4888452) | 4888452..4889369 | - | 918 | WP_004146663.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin |
| JY393_RS23595 (4889375) | 4889375..4890133 | - | 759 | WP_004177809.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin |
| JY393_RS23600 (4890219) | 4890219..4890947 | - | 729 | WP_004177810.1 | response regulator transcription factor | - |
| JY393_RS23605 (4891220) | 4891220..4893367 | + | 2148 | WP_012737173.1 | formate dehydrogenase H subunit alpha, selenocysteine-containing | - |
| JY393_RS23610 (4893364) | 4893364..4893507 | - | 144 | WP_022631365.1 | hypothetical protein | - |
| JY393_RS23615 (4893713) | 4893713..4894399 | + | 687 | WP_004151733.1 | tetratricopeptide repeat protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 306 a.a. Molecular weight: 34659.10 Da Isoelectric Point: 5.4707
>T195253 WP_004146663.1 NZ_CP071080:c4889369-4888452 [Klebsiella pneumoniae]
MDIQAPYYRQVALLMQVLPYVAVEREFALKGGTAINLFIRDFPRLSVDIDLAWVPLESRAIALPHIRDALARIAANLQQQ
AGMSAVLQANRSDEMRVIVTTDSAQIKIEVSPVARGTLYPPQEREVVGAVEDVFGYASLPVVSLPDLYGGKLCAALDRQH
PRDFYDVKLLLDAQELDRPIFNGFIAYLLSHNRPLAEVLNPRWKDIAEPFYREFSGMTFETIALEELTAVPNRMIAALKS
CFTQQDVDFLLSFKRGEPDWRLAPEMRIQDLPAVQWKLRNIHQMPAIKRAESLDKLEKVLAEWRS
MDIQAPYYRQVALLMQVLPYVAVEREFALKGGTAINLFIRDFPRLSVDIDLAWVPLESRAIALPHIRDALARIAANLQQQ
AGMSAVLQANRSDEMRVIVTTDSAQIKIEVSPVARGTLYPPQEREVVGAVEDVFGYASLPVVSLPDLYGGKLCAALDRQH
PRDFYDVKLLLDAQELDRPIFNGFIAYLLSHNRPLAEVLNPRWKDIAEPFYREFSGMTFETIALEELTAVPNRMIAALKS
CFTQQDVDFLLSFKRGEPDWRLAPEMRIQDLPAVQWKLRNIHQMPAIKRAESLDKLEKVLAEWRS
Download Length: 918 bp
>T195253 NZ_CP094459:176896-177306 [Burkholderia pyrrocinia]
ATGCCGCGCTACATGCTCGACACCAACATGTGCATCTATCTGATGAGGAATCAGCCGGAGCAGGTCGCAAGACGGTTTGC
GCAGTGTTACACGGGGGACGTCGTGATGTCGGCGGTCACGTATGCCGAGCTCGAGTACGGTGTCGCGGTGTGCGCGAATC
CTGACCGGGAGCGTCTAAATCTTGCCGCGCTGGTCGAGGATATTCCCGTTGCGCCGTTCGATGTGGCGGCTGCGCAAGCG
TACGGTCCTGTTCGCGACGCGACCCGCGAACGGAAGAAGGATCATCTCGACAAGCTGATCGCGGCCCACGCTGTGTCGCT
CGATGTCGTCCTCGTGACCAACAACGAGCGGGACTTCGCGAGCTATCCGGGGTTGCGACTGGAAAACTGGCTGAACGATT
CGTGTCCGTGA
ATGCCGCGCTACATGCTCGACACCAACATGTGCATCTATCTGATGAGGAATCAGCCGGAGCAGGTCGCAAGACGGTTTGC
GCAGTGTTACACGGGGGACGTCGTGATGTCGGCGGTCACGTATGCCGAGCTCGAGTACGGTGTCGCGGTGTGCGCGAATC
CTGACCGGGAGCGTCTAAATCTTGCCGCGCTGGTCGAGGATATTCCCGTTGCGCCGTTCGATGTGGCGGCTGCGCAAGCG
TACGGTCCTGTTCGCGACGCGACCCGCGAACGGAAGAAGGATCATCTCGACAAGCTGATCGCGGCCCACGCTGTGTCGCT
CGATGTCGTCCTCGTGACCAACAACGAGCGGGACTTCGCGAGCTATCCGGGGTTGCGACTGGAAAACTGGCTGAACGATT
CGTGTCCGTGA
Antitoxin
Download Length: 253 a.a. Molecular weight: 28548.92 Da Isoelectric Point: 10.0870
>AT195253 WP_004177809.1 NZ_CP071080:c4890133-4889375 [Klebsiella pneumoniae]
MATKLNWLLQNSAPGDVILQSWLSQHAISPSLAFKYAQSGWLKKRGNGVYARAGREPEWNDALACLQNQLAAPVYVAGLS
SLVWQGRSHYLQLKQNQCWLSVENKALLPKWFREFPGVEWIVISGKKLPVLDDRYRVTLDIKGKKLIGSAPELAAYELLS
AVPGTLSFNHAAELFQGLVNLNPRKVEYLLSVSQSVQAKRLYLFFASFYEHGWLKRIDSQKIDLGAGKRQIVENGKFNAQ
YQITVPERFQKE
MATKLNWLLQNSAPGDVILQSWLSQHAISPSLAFKYAQSGWLKKRGNGVYARAGREPEWNDALACLQNQLAAPVYVAGLS
SLVWQGRSHYLQLKQNQCWLSVENKALLPKWFREFPGVEWIVISGKKLPVLDDRYRVTLDIKGKKLIGSAPELAAYELLS
AVPGTLSFNHAAELFQGLVNLNPRKVEYLLSVSQSVQAKRLYLFFASFYEHGWLKRIDSQKIDLGAGKRQIVENGKFNAQ
YQITVPERFQKE
Download Length: 759 bp
>AT195253 NZ_CP094459:176660-176896 [Burkholderia pyrrocinia]
ATGCATACCACCAGGGTATTTCGGAACGGCAACTCGCAGGCCGTACGGATTCCAGCAGACCTTGCTTATGAGCGTAGCGA
TATCGAGCTGGAAATCGAGCGGGTGGGTGACGAAATCCGTATTCGGCCTATGCGGCGGCCTCTGACCTGTGTGCTCGAGA
AGTTTGCGAAATTCGGGCCGGATTTCATGTCCGAAGGACGCGGCGATCAGGAGCAGGCTGAGCGCGAGGGTCTGTGA
ATGCATACCACCAGGGTATTTCGGAACGGCAACTCGCAGGCCGTACGGATTCCAGCAGACCTTGCTTATGAGCGTAGCGA
TATCGAGCTGGAAATCGAGCGGGTGGGTGACGAAATCCGTATTCGGCCTATGCGGCGGCCTCTGACCTGTGTGCTCGAGA
AGTTTGCGAAATTCGGGCCGGATTTCATGTCCGAAGGACGCGGCGATCAGGAGCAGGCTGAGCGCGAGGGTCTGTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|