Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) txpA-ratA/-
Location 2715371..2715758 Replicon chromosome
Accession NZ_CP053181
Organism Enterococcus faecalis strain FMAMOB6

Toxin (Protein)


Gene name txpA Uniprot ID A0A1J6YG70
Locus tag HLJ13_RS13185 Protein ID WP_002396786.1
Coordinates 2715615..2715758 (+) Length 48 a.a.

Antitoxin (RNA)


Gene name ratA
Locus tag -
Coordinates 2715371..2715504 (-)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HLJ13_RS13175 2710947..2711051 + 105 WP_021164545.1 putative holin-like toxin -
HLJ13_RS13180 2711241..2715020 - 3780 WP_010818049.1 WxL domain-containing protein -
- 2715371..2715504 - 134 - - Antitoxin
HLJ13_RS13185 2715615..2715758 + 144 WP_002396786.1 putative holin-like toxin Toxin
HLJ13_RS13190 2715952..2719011 - 3060 WP_002398514.1 WxL domain-containing protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(14-47)


Sequences


Toxin        


Download         Length: 48 a.a.        Molecular weight: 5203.19 Da        Isoelectric Point: 8.6626

>T156185 WP_002396786.1 NZ_CP053181:2715615-2715758 [Enterococcus faecalis]
MNVSTKIYERRGLLSIAEALALMISFGSFIATLIFGILEAVKEDNKK

Download         Length: 144 bp

>T156185 NZ_CP068830:c2074802-2074428 [Escherichia coli]
ATGAAAACATTACCTGTATTACCCGGGCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTC
CCGACTGCTGGACCAGCACTATGGCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTG
AGGCAGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTGGAAAAATACGCGCTGGTGCGTACCGACCAGCCGGGATTC
AGCGCCTGTACCCGCTCTCAGTTAATAAACAGTATTGATATCCTCCGGGCACGCCGGGCAACCGGCCTGATGACCCGCGA
CAATTACAGAACGGTAAATAACATTACCCTGGGTAAGTATCCGGAGGCGAAATGA

Antitoxin


Download         Length: 134 bp

>AT156185 NZ_CP053181:c2715504-2715371 [Enterococcus faecalis]
TTGTGCTATAATAGCAATGAAAAGAGAGATATGCTGTAACATACCTCTCTAGTGTAGAGCCGTTTAAGACGGTGACCCGT
TATTATTTAAAAATAACCGTACTTGGTCAAAGTAGACGGTTATTTTTTCTTGTC

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A1J6YG70


Antitoxin

Download structure file

References