Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | /RES-TIGR02293 |
| Location | 2489992..2490908 | Replicon | chromosome |
| Accession | NZ_CP042861 | ||
| Organism | Providencia sp. 1709051003 | ||
Toxin (Protein)
| Gene name | - | Uniprot ID | - |
| Locus tag | FVA72_RS11280 | Protein ID | WP_110591697.1 |
| Coordinates | 2490450..2490908 (+) | Length | 153 a.a. |
Antitoxin (Protein)
| Gene name | - | Uniprot ID | D4BTW8 |
| Locus tag | FVA72_RS11275 | Protein ID | WP_004254502.1 |
| Coordinates | 2489992..2490453 (+) | Length | 154 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FVA72_RS11245 | 2485658..2486272 | + | 615 | WP_110591700.1 | LysE family translocator | - |
| FVA72_RS11250 | 2486296..2486769 | - | 474 | WP_096863737.1 | NUDIX domain-containing protein | - |
| FVA72_RS11255 | 2487121..2487762 | - | 642 | WP_004254492.1 | leucine efflux protein LeuE | - |
| FVA72_RS11260 | 2488236..2488937 | + | 702 | WP_004254495.1 | AzlC family ABC transporter permease | - |
| FVA72_RS11265 | 2488934..2489248 | + | 315 | WP_094960595.1 | AzlD domain-containing protein | - |
| FVA72_RS11270 | 2489436..2489903 | + | 468 | WP_110591698.1 | DUF1456 family protein | - |
| FVA72_RS11275 | 2489992..2490453 | + | 462 | WP_004254502.1 | DUF2384 domain-containing protein | Antitoxin |
| FVA72_RS11280 | 2490450..2490908 | + | 459 | WP_110591697.1 | RES domain-containing protein | Toxin |
| FVA72_RS11285 | 2490909..2491799 | - | 891 | WP_094960598.1 | LysR family transcriptional regulator | - |
| FVA72_RS11290 | 2491845..2492806 | - | 962 | Protein_2207 | acetyl-CoA carboxylase carboxyl transferase subunit alpha | - |
| FVA72_RS11295 | 2492912..2493334 | - | 423 | WP_110591696.1 | helix-turn-helix domain-containing protein | - |
| FVA72_RS11300 | 2493365..2493928 | - | 564 | WP_004254518.1 | GNAT family N-acetyltransferase | - |
| FVA72_RS11305 | 2493909..2495375 | - | 1467 | WP_094960601.1 | AMP nucleosidase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 153 a.a. Molecular weight: 17074.62 Da Isoelectric Point: 6.2048
>T136280 WP_110591697.1 NZ_CP042861:2490450-2490908 [Providencia sp. 1709051003]
MILYRLVKSNFAHDAWSGQGAMLYGGRWNHKGTPAVYTSTSISLATLEVLVHINQDILLSQFSLLSIDINDKYVMKLSLD
HLPTDWQQDPAPTSTMDIGTIWLNNQDSLALLIPSCIVPYEYNAIINPLHPQFQKALHTVKPLDFSVDPRLA
MILYRLVKSNFAHDAWSGQGAMLYGGRWNHKGTPAVYTSTSISLATLEVLVHINQDILLSQFSLLSIDINDKYVMKLSLD
HLPTDWQQDPAPTSTMDIGTIWLNNQDSLALLIPSCIVPYEYNAIINPLHPQFQKALHTVKPLDFSVDPRLA
Download Length: 459 bp
>T136280 NZ_CP042861:2490450-2490908 [Providencia sp. 1709051003]
ATGATTTTATATCGATTGGTTAAATCCAATTTTGCGCATGATGCATGGTCGGGCCAAGGAGCTATGCTCTACGGCGGGCG
TTGGAATCATAAAGGGACTCCTGCTGTTTATACTTCAACGAGTATTTCATTAGCGACCCTTGAAGTACTCGTTCACATCA
ATCAAGACATACTATTAAGCCAGTTCAGCTTACTATCCATAGATATCAATGATAAGTACGTGATGAAATTGTCGTTAGAT
CACCTTCCGACAGATTGGCAACAAGACCCCGCACCAACCTCCACCATGGATATTGGCACTATATGGCTTAATAACCAAGA
TAGTCTAGCATTATTAATTCCCTCTTGTATTGTTCCCTATGAATACAACGCAATTATTAACCCGTTACATCCGCAATTTC
AAAAAGCTTTACATACCGTTAAACCACTAGATTTTAGTGTTGACCCGCGCTTAGCATAA
ATGATTTTATATCGATTGGTTAAATCCAATTTTGCGCATGATGCATGGTCGGGCCAAGGAGCTATGCTCTACGGCGGGCG
TTGGAATCATAAAGGGACTCCTGCTGTTTATACTTCAACGAGTATTTCATTAGCGACCCTTGAAGTACTCGTTCACATCA
ATCAAGACATACTATTAAGCCAGTTCAGCTTACTATCCATAGATATCAATGATAAGTACGTGATGAAATTGTCGTTAGAT
CACCTTCCGACAGATTGGCAACAAGACCCCGCACCAACCTCCACCATGGATATTGGCACTATATGGCTTAATAACCAAGA
TAGTCTAGCATTATTAATTCCCTCTTGTATTGTTCCCTATGAATACAACGCAATTATTAACCCGTTACATCCGCAATTTC
AAAAAGCTTTACATACCGTTAAACCACTAGATTTTAGTGTTGACCCGCGCTTAGCATAA
Antitoxin
Download Length: 154 a.a. Molecular weight: 17090.56 Da Isoelectric Point: 9.9140
>AT136280 WP_004254502.1 NZ_CP042861:2489992-2490453 [Providencia sp. 1709051003]
MRNYIPTTPLQPTASSFKPLWRHVGLPAERGIELTHFLRQGLSVSVLDNIQEWSGMSKTELLRISGINERNIARRKNAGQ
PLNADESERIARLVRVFDAAVRLFNGDKHAASDWLNHPVKGLGHLRPIELIATESGAIEVIDLIGRIEHGVFS
MRNYIPTTPLQPTASSFKPLWRHVGLPAERGIELTHFLRQGLSVSVLDNIQEWSGMSKTELLRISGINERNIARRKNAGQ
PLNADESERIARLVRVFDAAVRLFNGDKHAASDWLNHPVKGLGHLRPIELIATESGAIEVIDLIGRIEHGVFS
Download Length: 462 bp
>AT136280 NZ_CP042861:2489992-2490453 [Providencia sp. 1709051003]
ATGAGAAACTATATCCCCACAACCCCACTTCAACCGACTGCTTCATCCTTTAAACCACTGTGGCGCCATGTAGGGTTACC
CGCAGAACGTGGTATTGAGTTAACTCATTTCTTGCGTCAAGGCCTATCTGTCTCTGTCTTAGACAATATCCAAGAATGGT
CAGGAATGAGCAAAACTGAATTATTGCGAATATCCGGCATTAATGAGCGCAATATTGCTCGACGTAAAAATGCTGGCCAG
CCCCTTAATGCTGATGAAAGTGAGAGAATTGCTCGTCTAGTGCGGGTATTCGATGCTGCGGTGCGTTTATTTAATGGAGA
TAAGCACGCGGCAAGTGATTGGCTTAACCACCCAGTTAAAGGGTTAGGACATTTACGCCCTATTGAGCTTATTGCGACAG
AAAGCGGAGCCATTGAAGTGATTGATTTGATTGGCCGTATTGAACATGGCGTATTCTCATGA
ATGAGAAACTATATCCCCACAACCCCACTTCAACCGACTGCTTCATCCTTTAAACCACTGTGGCGCCATGTAGGGTTACC
CGCAGAACGTGGTATTGAGTTAACTCATTTCTTGCGTCAAGGCCTATCTGTCTCTGTCTTAGACAATATCCAAGAATGGT
CAGGAATGAGCAAAACTGAATTATTGCGAATATCCGGCATTAATGAGCGCAATATTGCTCGACGTAAAAATGCTGGCCAG
CCCCTTAATGCTGATGAAAGTGAGAGAATTGCTCGTCTAGTGCGGGTATTCGATGCTGCGGTGCGTTTATTTAATGGAGA
TAAGCACGCGGCAAGTGATTGGCTTAACCACCCAGTTAAAGGGTTAGGACATTTACGCCCTATTGAGCTTATTGCGACAG
AAAGCGGAGCCATTGAAGTGATTGATTTGATTGGCCGTATTGAACATGGCGTATTCTCATGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|