Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | mazEF/MazF(toxin) |
Location | 3106703..3107273 | Replicon | chromosome |
Accession | NZ_CP041874 | ||
Organism | Mycobacterium tuberculosis strain 1-0009P6C4 |
Toxin (Protein)
Gene name | mazF | Uniprot ID | P71650 |
Locus tag | FPJ32_RS14660 | Protein ID | WP_003414166.1 |
Coordinates | 3106703..3107059 (-) | Length | 119 a.a. |
Antitoxin (Protein)
Gene name | mazE | Uniprot ID | P0CL61 |
Locus tag | FPJ32_RS14665 | Protein ID | WP_003901465.1 |
Coordinates | 3107043..3107273 (-) | Length | 77 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
FPJ32_RS14640 | 3102155..3103843 | - | 1689 | WP_003414155.1 | alpha/beta hydrolase family protein | - |
FPJ32_RS14645 | 3103847..3104173 | - | 327 | WP_003414157.1 | hypothetical protein | - |
FPJ32_RS14650 | 3104346..3104933 | + | 588 | WP_003914429.1 | DUF3558 family protein | - |
FPJ32_RS14655 | 3104952..3106601 | + | 1650 | WP_003899485.1 | CocE/NonD family hydrolase | - |
FPJ32_RS14660 | 3106703..3107059 | - | 357 | WP_003414166.1 | type II toxin-antitoxin system toxin endoribonuclease MazF9 | Toxin |
FPJ32_RS14665 | 3107043..3107273 | - | 231 | WP_003901465.1 | antitoxin MazE | Antitoxin |
FPJ32_RS14670 | 3107316..3108359 | - | 1044 | WP_003414172.1 | DUF2293 domain-containing protein | - |
FPJ32_RS14675 | 3108550..3108825 | + | 276 | WP_003911993.1 | DUF1778 domain-containing protein | - |
FPJ32_RS14680 | 3109001..3109255 | - | 255 | WP_003917684.1 | hypothetical protein | - |
FPJ32_RS14685 | 3109403..3109807 | + | 405 | WP_003414181.1 | hypothetical protein | - |
FPJ32_RS14690 | 3109804..3109995 | + | 192 | WP_003414184.1 | hypothetical protein | - |
FPJ32_RS14695 | 3110059..3111348 | + | 1290 | Protein_2900 | transposase family protein | - |
FPJ32_RS14700 | 3111582..3111839 | + | 258 | WP_003899489.1 | hypothetical protein | - |
FPJ32_RS14705 | 3111944..3112255 | + | 312 | WP_003414190.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 119 a.a. Molecular weight: 12858.73 Da Isoelectric Point: 9.1962
>T134484 WP_003414166.1 NZ_CP041874:c3107059-3106703 [Mycobacterium tuberculosis]
VMRRGEIWQVDLDPARGSEANNQRPAVVVSNDRANATATRLGRGVITVVPVTSNIAKVYPFQVLLSATTTGLQVDCKAQA
EQIRSIATERLLRPIGRVSAAELAQLDEALKLHLDLWS
VMRRGEIWQVDLDPARGSEANNQRPAVVVSNDRANATATRLGRGVITVVPVTSNIAKVYPFQVLLSATTTGLQVDCKAQA
EQIRSIATERLLRPIGRVSAAELAQLDEALKLHLDLWS
Download Length: 357 bp
>T134484 NZ_CP041874:c3107059-3106703 [Mycobacterium tuberculosis]
GTGATGCGCCGCGGTGAGATTTGGCAGGTCGATCTCGACCCCGCTCGAGGTAGCGAAGCGAACAACCAGCGCCCCGCCGT
CGTCGTCAGCAACGACCGGGCCAACGCGACCGCCACGCGTCTTGGGCGCGGCGTCATCACCGTCGTGCCGGTGACGAGCA
ACATCGCCAAGGTCTATCCGTTTCAGGTGTTGTTGTCGGCCACCACTACTGGTCTCCAGGTCGACTGCAAGGCGCAGGCC
GAGCAAATCAGATCGATTGCTACCGAGCGGTTGCTCCGGCCAATCGGCCGAGTTTCAGCCGCCGAACTTGCCCAGCTCGA
TGAGGCTTTGAAACTGCATCTCGACTTATGGTCGTAG
GTGATGCGCCGCGGTGAGATTTGGCAGGTCGATCTCGACCCCGCTCGAGGTAGCGAAGCGAACAACCAGCGCCCCGCCGT
CGTCGTCAGCAACGACCGGGCCAACGCGACCGCCACGCGTCTTGGGCGCGGCGTCATCACCGTCGTGCCGGTGACGAGCA
ACATCGCCAAGGTCTATCCGTTTCAGGTGTTGTTGTCGGCCACCACTACTGGTCTCCAGGTCGACTGCAAGGCGCAGGCC
GAGCAAATCAGATCGATTGCTACCGAGCGGTTGCTCCGGCCAATCGGCCGAGTTTCAGCCGCCGAACTTGCCCAGCTCGA
TGAGGCTTTGAAACTGCATCTCGACTTATGGTCGTAG
Antitoxin
Download Length: 77 a.a. Molecular weight: 8231.01 Da Isoelectric Point: 4.1809
>AT134484 WP_003901465.1 NZ_CP041874:c3107273-3107043 [Mycobacterium tuberculosis]
VKLSVSLSDDDVAILDAYVKRAGLPSRSAGLQHAIRVLRYPTLEDDYANAWQEWSAAGDTDAWEQTVGDGVGDAPR
VKLSVSLSDDDVAILDAYVKRAGLPSRSAGLQHAIRVLRYPTLEDDYANAWQEWSAAGDTDAWEQTVGDGVGDAPR
Download Length: 231 bp
>AT134484 NZ_CP041874:c3107273-3107043 [Mycobacterium tuberculosis]
GTGAAGTTGAGCGTGAGCCTGTCCGATGACGACGTCGCGATCCTGGACGCATATGTGAAACGAGCGGGATTACCATCCCG
CTCCGCCGGCCTGCAGCATGCGATCCGCGTGCTTCGCTACCCCACGCTCGAAGATGACTATGCCAACGCATGGCAAGAAT
GGTCGGCAGCCGGCGACACGGACGCGTGGGAGCAGACCGTCGGCGACGGAGTCGGTGATGCGCCGCGGTGA
GTGAAGTTGAGCGTGAGCCTGTCCGATGACGACGTCGCGATCCTGGACGCATATGTGAAACGAGCGGGATTACCATCCCG
CTCCGCCGGCCTGCAGCATGCGATCCGCGTGCTTCGCTACCCCACGCTCGAAGATGACTATGCCAACGCATGGCAAGAAT
GGTCGGCAGCCGGCGACACGGACGCGTGGGAGCAGACCGTCGGCGACGGAGTCGGTGATGCGCCGCGGTGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|