Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) rlegTA/AbiEii-AbiEi
Location 3075562..3077054 Replicon chromosome
Accession NZ_CP036281
Organism Polystyrenella longa strain Pla110

Toxin (Protein)


Gene name rlegT Uniprot ID -
Locus tag Pla110_RS11440 Protein ID WP_144995894.1
Coordinates 3076161..3077054 (+) Length 298 a.a.

Antitoxin (Protein)


Gene name rlegA Uniprot ID -
Locus tag Pla110_RS11435 Protein ID WP_144995893.1
Coordinates 3075562..3076164 (+) Length 201 a.a.

Genomic Context

Pla110_RS11420Pla110_RS11425Pla110_RS11430Pla110_RS11435Pla110_RS11440Pla110_RS11410Pla110_RS11415Pla110_RS11445Pla110_RS11455Pla110_RS11460Pla110_RS11465
Location: 3072753..3073256 (504 bp)
Type: Others
Protein ID: WP_144995890.1
Location: 3073253..3074797 (1545 bp)
Type: Others
Protein ID: WP_144995891.1
Location: 3074794..3075198 (405 bp)
Type: Others
Protein ID: WP_144995892.1
Location: 3075562..3076164 (603 bp)
Type: Antitoxin
Protein ID: WP_144995893.1
Location: 3076161..3077054 (894 bp)
Type: Toxin
Protein ID: WP_144995894.1
Location: 3070875..3071540 (666 bp)
Type: Others
Protein ID: WP_197440144.1
Location: 3071640..3072398 (759 bp)
Type: Others
Protein ID: WP_144995889.1
Location: 3077097..3077291 (195 bp)
Type: Others
Protein ID: WP_144995895.1
Location: 3077909..3078334 (426 bp)
Type: Others
Protein ID: WP_144995896.1
Location: 3078596..3078955 (360 bp)
Type: Others
Protein ID: WP_144995897.1
Location: 3079522..3081336 (1815 bp)
Type: Others
Protein ID: WP_144995898.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
Pla110_RS114103070875..3071540-666WP_197440144.1sigma-70 family RNA polymerase sigma factor-
Pla110_RS114153071640..3072398-759WP_144995889.1Rrf2 family transcriptional regulator-
Pla110_RS114203072753..3073256+504WP_144995890.1DUF2924 domain-containing protein-
Pla110_RS114253073253..3074797+1545WP_144995891.1recombinase family protein-
Pla110_RS114303074794..3075198+405WP_144995892.1hypothetical protein-
Pla110_RS114353075562..3076164+603WP_144995893.1type IV toxin-antitoxin system AbiEi family antitoxin domain-containing proteinAntitoxin
Pla110_RS114403076161..3077054+894WP_144995894.1nucleotidyl transferase AbiEii/AbiGii toxin family proteinToxin
Pla110_RS114453077097..3077291-195WP_144995895.1hypothetical protein-
Pla110_RS114553077909..3078334-426WP_144995896.1ATP-binding protein-
Pla110_RS114603078596..3078955-360WP_144995897.1STAS domain-containing protein-
Pla110_RS114653079522..3081336-1815WP_144995898.1translational GTPase TypA-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Nucleotidyl transferase AbiEii toxin, Type IV TA system

(37-262)

Antitoxin

Transcriptional regulator, AbiEi antitoxin

(9-51)


Sequences

Toxin        


Download         Length: 298 a.a.        Molecular weight: 34351.11 Da        Isoelectric Point: 5.1449

>T119467 WP_144995894.1 NZ_CP036281:3076161-3077054 [Polystyrenella longa]
MTKNIAASVRQKLLNISRERKQRFNELLLRYALERWLYRLSQSRYSEKFVLKGAMMLTAWQIPTTRPTRDIDMLAQISND
LDAVLGVIIEINQTETEPDGLIFDTENIITERIAEDALYEGVRARFRGNLDSARLDMQIDIGFSDIVTPGPVDMTFPTIL
DQPAPQLNAYNPETAIAEKFEAMVKLGELNSRMKDFYDIWALSQFHSFTKSLLDKAVRSTFRRRDTELDTNASCFSKEYG
TSENKQKQWQAFLKRSQLNEVAPANFEDVWKATIKFLEPIIHPQEDELKWEAGGPWK

Download         Length: 894 bp

>T119467 NZ_CP036281:3076161-3077054 [Polystyrenella longa]
ATGACCAAAAACATCGCAGCCTCTGTACGACAGAAACTTTTAAACATTTCCCGCGAAAGGAAGCAACGTTTCAACGAACT
CCTCTTACGATATGCTCTGGAGCGGTGGCTCTACCGGTTATCCCAAAGTCGCTATTCAGAGAAGTTCGTGTTGAAAGGAG
CCATGATGCTGACAGCATGGCAAATACCGACGACACGCCCAACCAGAGACATCGATATGCTCGCCCAAATATCCAACGAC
TTGGATGCCGTACTAGGAGTGATCATAGAAATCAATCAGACTGAGACGGAACCCGATGGATTGATTTTTGATACCGAGAA
CATAATAACGGAGCGAATCGCCGAAGACGCGTTGTACGAAGGAGTGCGCGCCCGATTTCGAGGCAATCTGGATTCCGCGC
GACTGGATATGCAAATCGACATTGGATTCAGTGACATTGTTACTCCCGGGCCGGTGGATATGACCTTTCCAACGATTTTG
GACCAACCCGCTCCCCAACTGAATGCCTACAACCCAGAGACCGCCATCGCGGAGAAATTTGAAGCGATGGTCAAGTTAGG
AGAACTCAACAGTCGAATGAAAGATTTCTATGACATATGGGCACTGTCACAATTCCATTCATTCACTAAATCGTTGCTCG
ATAAAGCAGTCCGGTCCACTTTCCGACGCCGGGACACAGAACTGGATACGAATGCATCGTGCTTCTCTAAAGAGTATGGC
ACATCTGAAAACAAGCAGAAGCAATGGCAGGCATTTTTGAAGCGAAGCCAACTGAACGAGGTCGCTCCCGCAAATTTTGA
AGATGTTTGGAAAGCTACGATCAAATTCCTAGAGCCGATTATTCACCCGCAAGAGGACGAACTAAAATGGGAGGCAGGTG
GCCCCTGGAAATAA

Antitoxin


Download         Length: 201 a.a.        Molecular weight: 22780.55 Da        Isoelectric Point: 9.9610

>AT119467 WP_144995893.1 NZ_CP036281:3075562-3076164 [Polystyrenella longa]
MQKTSKKALKIISKKGGIIRTREALEYGIHPRTLYSLRDQGDLEIISRGLYKLSSLPPVGDPDLELVAGRIPQGIVCLIS
ALAIHELTTQIPHEVHLAIPRTARYPVCHEVPIKIYRFSDLAYKSGIIQKEIDGFKVKVYDSEKTLADTFKYRNKIGLDV
FLEALNNYQRRKDSSLQKVLEYAKIDRVSKQIRPYLEATT

Download         Length: 603 bp

>AT119467 NZ_CP036281:3075562-3076164 [Polystyrenella longa]
ATGCAGAAAACAAGTAAAAAAGCACTAAAAATAATATCAAAAAAAGGAGGAATAATTCGGACGAGAGAGGCTCTCGAATA
CGGAATTCACCCACGAACCCTCTATTCGCTACGAGACCAAGGCGACCTCGAAATCATTTCGCGAGGACTGTACAAACTGT
CGTCTCTACCGCCTGTAGGTGACCCGGATCTGGAACTGGTGGCCGGACGCATTCCCCAAGGCATCGTATGCCTAATATCC
GCACTTGCGATCCATGAACTCACCACGCAGATACCGCACGAAGTTCATCTCGCCATCCCAAGGACGGCACGATATCCCGT
CTGTCATGAAGTCCCCATAAAGATCTATCGATTTTCCGATCTCGCATACAAATCGGGAATCATCCAAAAAGAAATCGATG
GCTTCAAGGTTAAGGTCTATGACTCGGAGAAGACCCTCGCGGATACATTCAAGTATCGGAATAAAATCGGGCTCGACGTC
TTCCTCGAGGCACTCAACAACTACCAGAGACGTAAAGATTCTTCACTGCAGAAGGTACTGGAATACGCCAAAATCGATAG
GGTTTCGAAACAGATCCGTCCATATCTGGAGGCCACAACATGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References