Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) rlegTA/AbiEii(toxin)
Location 4752307..4753783 Replicon chromosome
Accession NZ_CP028968
Organism Aminobacter sp. MSH1

Toxin (Protein)


Gene name rlegT Uniprot ID -
Locus tag DCS14_RS23905 Protein ID WP_108609042.1
Coordinates 4752307..4753173 (-) Length 289 a.a.

Antitoxin (Protein)


Gene name rlegA Uniprot ID -
Locus tag DCS14_RS23910 Protein ID WP_108609043.1
Coordinates 4753166..4753783 (-) Length 206 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
DCS14_RS23905 4752307..4753173 - 867 WP_108609042.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Toxin
DCS14_RS23910 4753166..4753783 - 618 WP_108609043.1 transcriptional regulator Antitoxin
DCS14_RS23915 4753970..4754305 + 336 WP_108609044.1 helix-turn-helix domain-containing protein -
DCS14_RS23920 4754496..4755689 + 1194 WP_108609045.1 DUF932 domain-containing protein -
DCS14_RS23925 4755865..4757994 + 2130 WP_108609046.1 ParB/RepB/Spo0J family partition protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Nucleotidyl transferase AbiEii toxin, Type IV TA system

(38-265)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 289 a.a.        Molecular weight: 31954.42 Da        Isoelectric Point: 5.2493

>T104536 WP_108609042.1 NZ_CP028968:c4753173-4752307 [Aminobacter sp. MSH1]
MAKEIKNIGASVRARLLQVSKASGQTFDLVLTRFALERLLFRLSQSPHADRFVLKGAMLMMSWFDDPHRGTRDLDLLGFG
DPSAEPMLATFREILAQGAADGVEFDVDALRVDRIREELEYGGLRLRTTASIGGARISLTIDIGFGDAVEPGAEELDYPS
MLDFPMPRLRGYARETVIAEKFQAMVALGRANSRMKDFYDIWILSRSFTFGNDRLARAIAATFARRETPIPEGLPDALTS
AFAADEQKQRQWRAFVKDVAHDPGDLANVVGDIAEFLMPHAASARSDQ

Download         Length: 867 bp

>T104536 NZ_CP028968:c4753173-4752307 [Aminobacter sp. MSH1]
ATGGCTAAGGAGATCAAGAATATCGGCGCCTCGGTTCGCGCCCGCCTGCTGCAGGTCTCCAAGGCGAGCGGCCAGACCTT
CGATCTTGTCCTGACCCGCTTCGCGCTGGAGCGGCTGCTCTTCCGGCTCAGCCAGTCACCCCACGCCGACCGCTTCGTGC
TGAAGGGCGCGATGCTGATGATGAGTTGGTTCGATGACCCGCACCGCGGCACGCGTGACCTTGATCTGCTGGGCTTCGGC
GATCCGAGCGCGGAGCCGATGCTGGCGACTTTTCGGGAGATCCTCGCGCAGGGTGCTGCCGACGGCGTGGAGTTCGACGT
CGATGCGCTCCGTGTAGATCGAATCCGCGAGGAACTGGAGTATGGCGGCCTGCGACTGCGGACAACAGCATCGATCGGCG
GCGCCCGGATCAGTCTGACGATCGACATCGGCTTTGGCGATGCGGTGGAGCCTGGCGCCGAAGAGCTGGACTATCCTTCC
ATGCTGGACTTTCCCATGCCCCGGCTGCGTGGCTACGCGCGGGAAACCGTCATTGCCGAGAAATTCCAGGCGATGGTGGC
GCTGGGGCGGGCGAATAGCCGGATGAAGGACTTCTACGACATCTGGATTCTCAGCCGCTCCTTCACCTTTGGCAACGATA
GGCTGGCACGCGCGATCGCGGCGACCTTCGCGCGACGCGAGACGCCGATTCCTGAAGGCCTGCCTGATGCGTTGACATCG
GCTTTCGCTGCGGACGAGCAGAAGCAGCGGCAATGGCGCGCCTTCGTCAAAGACGTTGCGCACGATCCGGGCGATCTCGC
TAACGTCGTAGGTGACATAGCCGAATTCCTGATGCCCCATGCCGCCTCAGCGAGGTCGGACCAATGA

Antitoxin


Download         Length: 206 a.a.        Molecular weight: 22339.80 Da        Isoelectric Point: 10.3271

>AT104536 WP_108609043.1 NZ_CP028968:c4753783-4753166 [Aminobacter sp. MSH1]
VPTSMSQRQIAHTVLTARGISRLAELREAGVTAATMSRMERDGEVLRLARGLYQLSDAPLDVHHSLAEAAKRVPKGVVCL
VSALAFHGLTDQLPRQVWLAVGQKDWSPKPEGTPIRLVRFTDRLLTEGVETHAVEGVAVKVFGVAKTLADCFRYRNKIGL
SVAIEGLQEALRQRKTTPGEIARQAERGTVATVIRPYLEALTANG

Download         Length: 618 bp

>AT104536 NZ_CP028968:c4753783-4753166 [Aminobacter sp. MSH1]
GTGCCAACATCCATGTCCCAACGCCAGATTGCCCATACCGTACTGACCGCGCGCGGAATTTCGCGCCTGGCGGAGCTGCG
CGAGGCGGGCGTAACGGCCGCCACTATGAGCCGCATGGAACGCGACGGCGAGGTGCTTCGGCTCGCGCGAGGACTTTATC
AACTTTCCGATGCGCCCCTCGACGTCCACCACAGTCTCGCAGAGGCCGCCAAACGGGTCCCCAAAGGCGTGGTTTGCCTC
GTTTCGGCCCTGGCTTTTCATGGTCTGACGGATCAGCTCCCGAGGCAGGTTTGGCTCGCCGTGGGTCAGAAGGACTGGTC
CCCGAAACCCGAAGGCACGCCTATTCGGCTGGTACGTTTTACAGATCGTCTACTGACGGAGGGTGTTGAAACGCACGCTG
TCGAGGGGGTGGCCGTGAAGGTCTTCGGCGTCGCAAAGACGCTCGCCGATTGCTTCCGATATCGGAACAAGATTGGCCTG
TCCGTGGCGATCGAAGGCCTTCAGGAAGCGCTGCGCCAGCGCAAGACGACGCCGGGCGAGATTGCCAGGCAGGCTGAGCG
AGGAACGGTCGCCACGGTCATTCGGCCCTATCTCGAGGCGCTGACCGCTAATGGCTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References