Detailed information of TA system
Overview
TA module
| Type | IV | Classification (family/domain) | yeeUV (cbtA-cbeA)/CbtA-CbeA |
| Location | 4991757..4992552 | Replicon | chromosome |
| Accession | NZ_CP028742 | ||
| Organism | Escherichia coli strain A33 | ||
Toxin (Protein)
| Gene name | yeeV | Uniprot ID | A0A658LKE6 |
| Locus tag | AOY86_RS24195 | Protein ID | WP_001596171.1 |
| Coordinates | 4992178..4992552 (+) | Length | 125 a.a. |
Antitoxin (Protein)
| Gene name | yeeU | Uniprot ID | - |
| Locus tag | AOY86_RS24190 | Protein ID | WP_240768470.1 |
| Coordinates | 4991757..4992131 (+) | Length | 125 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY86_RS24155 (4987599) | 4987599..4988279 | + | 681 | WP_240768466.1 | WYL domain-containing protein | - |
| AOY86_RS24160 (4988427) | 4988427..4989104 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| AOY86_RS24165 (4989110) | 4989110..4989343 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| AOY86_RS24170 (4989433) | 4989433..4990251 | + | 819 | WP_240768468.1 | DUF932 domain-containing protein | - |
| AOY86_RS24175 (4990333) | 4990333..4990812 | + | 480 | WP_096997664.1 | antirestriction protein | - |
| AOY86_RS24180 (4990828) | 4990828..4991304 | + | 477 | WP_001186773.1 | RadC family protein | - |
| AOY86_RS24185 (4991373) | 4991373..4991594 | + | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| AOY86_RS24190 (4991757) | 4991757..4992131 | + | 375 | WP_240768470.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin |
| AOY86_RS24195 (4992178) | 4992178..4992552 | + | 375 | WP_001596171.1 | TA system toxin CbtA family protein | Toxin |
| AOY86_RS24200 (4992549) | 4992549..4993040 | + | 492 | WP_001596172.1 | DUF5983 family protein | - |
| AOY86_RS24205 (4993052) | 4993052..4993249 | + | 198 | WP_053266182.1 | DUF957 domain-containing protein | - |
| AOY86_RS24210 (4993334) | 4993334..4994176 | + | 843 | WP_240768649.1 | DUF4942 domain-containing protein | - |
| AOY86_RS24215 (4994772) | 4994772..4995269 | + | 498 | WP_000509811.1 | hypothetical protein | - |
| AOY86_RS24220 (4995436) | 4995436..4996359 | + | 924 | WP_000535950.1 | carboxylate/amino acid/amine transporter | - |
| AOY86_RS24225 (4996490) | 4996490..4997062 | - | 573 | WP_001165549.1 | recombinase family protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | - | 4987325..5033918 | 46593 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 125 a.a. Molecular weight: 14161.14 Da Isoelectric Point: 6.7041
>T103349 WP_001596171.1 NZ_CP028742:4992178-4992552 [Escherichia coli]
MKTLPDTHVREASRCPSPVTIWQTLLARLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYELVRTDQPEF
SACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKYPEAK
MKTLPDTHVREASRCPSPVTIWQTLLARLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYELVRTDQPEF
SACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKYPEAK
Download Length: 375 bp
>T103349 NZ_CP028742:4992178-4992552 [Escherichia coli]
ATGAAAACATTACCTGACACACACGTACGGGAGGCATCGCGTTGCCCGTCTCCCGTCACCATCTGGCAGACACTGCTCGC
CCGACTGCTGGACCAGCACTACGGCCTCACGCTGAATGACACTCCGTTCGCTGATGAACGTGTGATTGAGCAGCATATTG
AGGCCGGCATTTCACTGTGCGATGCAGTGAACTTTCTTGTTGAAAAATACGAACTGGTGCGTACCGACCAGCCGGAATTC
AGTGCCTGTACCCGTTCTCAGTTAATAAACAGCATCGATATCCTCCGGGCTCGCAGGGCGACCGGCCTGATGACCCGCGA
CAATTACAGAACGGTAAATAACATTACCCTGGGTAAGTATCCGGAGGCGAAATGA
ATGAAAACATTACCTGACACACACGTACGGGAGGCATCGCGTTGCCCGTCTCCCGTCACCATCTGGCAGACACTGCTCGC
CCGACTGCTGGACCAGCACTACGGCCTCACGCTGAATGACACTCCGTTCGCTGATGAACGTGTGATTGAGCAGCATATTG
AGGCCGGCATTTCACTGTGCGATGCAGTGAACTTTCTTGTTGAAAAATACGAACTGGTGCGTACCGACCAGCCGGAATTC
AGTGCCTGTACCCGTTCTCAGTTAATAAACAGCATCGATATCCTCCGGGCTCGCAGGGCGACCGGCCTGATGACCCGCGA
CAATTACAGAACGGTAAATAACATTACCCTGGGTAAGTATCCGGAGGCGAAATGA
Antitoxin
Download Length: 125 a.a. Molecular weight: 13754.55 Da Isoelectric Point: 6.4757
>AT103349 WP_240768470.1 NZ_CP028742:4991757-4992131 [Escherichia coli]
VSDTLPGITHPDDNHDRPWWGLPCTVRPCFGARLVQEGNRLHYLADRAGIRGRFSDADAYHLDQAFPLLMKQLELMLTSG
ELNPRHQHTVTLYAKGLTCEADTLGSCGYVYLTVYPTPAPATTS
VSDTLPGITHPDDNHDRPWWGLPCTVRPCFGARLVQEGNRLHYLADRAGIRGRFSDADAYHLDQAFPLLMKQLELMLTSG
ELNPRHQHTVTLYAKGLTCEADTLGSCGYVYLTVYPTPAPATTS
Download Length: 375 bp
>AT103349 NZ_CP028742:4991757-4992131 [Escherichia coli]
GTGTCAGACACACTCCCCGGGATAACGCATCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTTCCCTGCACAGTGAG
GCCCTGTTTTGGCGCCCGTCTGGTGCAGGAGGGTAACCGCCTGCATTACCTTGCCGACCGCGCCGGTATCAGAGGCCGCT
TCAGCGACGCAGATGCATACCATCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGT
GAACTGAATCCCCGACATCAGCATACCGTCACGCTGTATGCAAAAGGGCTGACCTGCGAAGCCGACACCCTCGGCTCCTG
TGGTTACGTTTATCTGACTGTTTATCCGACACCGGCACCCGCAACCACCTCATAA
GTGTCAGACACACTCCCCGGGATAACGCATCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTTCCCTGCACAGTGAG
GCCCTGTTTTGGCGCCCGTCTGGTGCAGGAGGGTAACCGCCTGCATTACCTTGCCGACCGCGCCGGTATCAGAGGCCGCT
TCAGCGACGCAGATGCATACCATCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGT
GAACTGAATCCCCGACATCAGCATACCGTCACGCTGTATGCAAAAGGGCTGACCTGCGAAGCCGACACCCTCGGCTCCTG
TGGTTACGTTTATCTGACTGTTTATCCGACACCGGCACCCGCAACCACCTCATAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|