TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | - (AT183) | Predicted domain | - |
| Locus tag | orf3696 | Length | 138 a.a. |
| Coordinates | 3923699..3924115 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf3685 | 3919661..3920230 | + | 570 | ORF3685 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3686 | 3920242..3920847 | + | 606 | ORF3686 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3687 | 3920874..3921470 | + | 597 | ORF3687 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3688 | 3921520..3922377 | + | 858 | ORF3688 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3689 | 3922481..3923689 | + | 1209 | ORF3689 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3690 | 3923699..3924115 | - | 417 | ORF3690 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf3691 | 3924203..3924796 | + | 594 | ORF3691 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3692 | 3924909..3925589 | - | 681 | ORF3692 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3693 | 3925753..3926961 | + | 1209 | ORF3693 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3694 | 3926940..3927452 | - | 513 | ORF3694 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3695 | 3927534..3928157 | + | 624 | ORF3695 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3696 | 3928135..3928758 | - | 624 | ORF3696 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 16774.42 Da Isoelectric Point: 10.4224
>ORF3690 Orphan_TA_89 Antitoxin
MYIEQHSRYQNKANNIQLRYDDKQFHTTVIKDVLLWIEHNLDQSLLLDDVANKAGYTKWY
FQRLFKKVTGVTLASYIRARRLTKAAVELRLTKKTILEIALKYQFDSQQSFTRRFKYIFK
VTPSYYRRNKLWELEAMH
MYIEQHSRYQNKANNIQLRYDDKQFHTTVIKDVLLWIEHNLDQSLLLDDVANKAGYTKWY
FQRLFKKVTGVTLASYIRARRLTKAAVELRLTKKTILEIALKYQFDSQQSFTRRFKYIFK
VTPSYYRRNKLWELEAMH
Download Length: 417 bp
>ORF3690 Orphan_TA_89 Antitoxin
TCAGTGCATTGCCTCCAATTCCCATAATTTATTACGCCGATAATAACTTGGTGTAACCTT
AAAAATGTACTTAAATCGACGTGTAAAAGATTGTTGGGAATCAAATTGATATTTTAATGC
GATCTCAAGGATAGTTTTTTTCGTCAACCTCAACTCAACAGCCGCTTTCGTCAAACGACG
AGCACGAATATAGCTAGCCAGTGTGACCCCTGTTACTTTTTTGAACAGCCGCTGAAAATA
CCACTTGGTATAACCCGCTTTATTCGCCACATCATCAAGCAGTAAAGACTGATCTAAATT
ATGTTCAATCCATAATAGAACATCTTTGATAACCGTTGTATGAAACTGCTTATCATCATA
TCTTAATTGGATGTTATTAGCTTTATTTTGATAGCGAGAATGCTGTTCAATATACAT
TCAGTGCATTGCCTCCAATTCCCATAATTTATTACGCCGATAATAACTTGGTGTAACCTT
AAAAATGTACTTAAATCGACGTGTAAAAGATTGTTGGGAATCAAATTGATATTTTAATGC
GATCTCAAGGATAGTTTTTTTCGTCAACCTCAACTCAACAGCCGCTTTCGTCAAACGACG
AGCACGAATATAGCTAGCCAGTGTGACCCCTGTTACTTTTTTGAACAGCCGCTGAAAATA
CCACTTGGTATAACCCGCTTTATTCGCCACATCATCAAGCAGTAAAGACTGATCTAAATT
ATGTTCAATCCATAATAGAACATCTTTGATAACCGTTGTATGAAACTGCTTATCATCATA
TCTTAATTGGATGTTATTAGCTTTATTTTGATAGCGAGAATGCTGTTCAATATACAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT183 | Pseudomonas aeruginosa PAO1 |
32.099 |
28.521 |
0.188 |