TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | - (AT183) | Predicted domain | - |
| Locus tag | orf3502 | Length | 284 a.a. |
| Coordinates | 3715899..3716753 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf3494 | 3711626..3712294 | + | 669 | ORF3494 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3495 | 3712537..3713232 | - | 696 | ORF3495 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3496 | 3713225..3714652 | - | 1428 | ORF3496 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3497 | 3714663..3715382 | - | 720 | ORF3497 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3498 | 3715899..3716753 | - | 855 | ORF3498 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf3499 | 3716979..3718304 | + | 1326 | ORF3499 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3500 | 3718661..3719254 | + | 594 | ORF3500 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3501 | 3719414..3720283 | - | 870 | ORF3501 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3502 | 3720532..3721389 | + | 858 | ORF3502 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 31504.44 Da Isoelectric Point: 7.2124
>ORF3498 Orphan_TA_83 Antitoxin
MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHALTQGAAKLEMPTGEIFT
LRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSARYFLTSLPETLFLAPVNHSVEY
NWLREAIPFLQQESRSAMPGVDALCSQICATFFTLAVREWIAQVNTEKNILSLLLHPRLG
AVIQQMLEMPGHAWTVESLASIAHMSRASFAQLFRDVSGTTPLAVLTKLRLQIAAQMFSR
EMLPVVVIAESVGYASESSFHKAFVREFGCTPGEYRERVRQLAP
MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHALTQGAAKLEMPTGEIFT
LRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSARYFLTSLPETLFLAPVNHSVEY
NWLREAIPFLQQESRSAMPGVDALCSQICATFFTLAVREWIAQVNTEKNILSLLLHPRLG
AVIQQMLEMPGHAWTVESLASIAHMSRASFAQLFRDVSGTTPLAVLTKLRLQIAAQMFSR
EMLPVVVIAESVGYASESSFHKAFVREFGCTPGEYRERVRQLAP
Download Length: 855 bp
>ORF3498 Orphan_TA_83 Antitoxin
TCAGGGTGCAAGCTGTCTGACCCTTTCCCGATATTCTCCCGGAGTACAACCAAACTCGCG
GACAAACGCCTTGTGAAAAGATGATTCACTGGCATAGCCTACTGACTCAGCGATCACCAC
AACAGGGAGCATTTCCCGGGAAAACATCTGGGCCGCTATTTGTAGACGCAACTTTGTTAA
TACAGCCAGCGGCGTGGTTCCGGAAACATCACGGAAAAGCTGGGCAAAACTTGCCCGAGA
CATGTGGGCGATGCTGGCCAGCGATTCGACGGTCCAGGCGTGTCCTGGCATTTCCAGCAT
TTGCTGTATTACCGCACCAAGACGTGGATGCAGAAGCAAACTGAGAATGTTTTTCTCTGT
ATTAACCTGTGCAATCCACTCACGCACCGCGAGGGTAAAGAATGTAGCGCAGATCTGGCT
ACACAGTGCATCCACTCCCGGCATCGCCGATCTGGATTCCTGTTGTAAAAACGGGATCGC
CTCCCTCAGCCAGTTATATTCCACGCTGTGGTTAACTGGTGCTAAAAACAGCGTTTCCGG
CAAAGACGTTAAAAAATAACGCGCCGAATGTTGCAGCCGAAGAGTGCCACAGACAATACA
GGTCGATTCATTATCGACATGACTCAGGCGATGAGCTGAATTTTGTGGTAGCAGGACCAC
ATTTCCCGGGCGTAATGTAAAAATCTCTCCCGTCGGCATTTCCAGCTTCGCCGCTCCTTG
CGTTAACGCATGCCAACGAATAACCGATAATTCCCCGGCACCATGTGGAAGCTGCCAGTC
ACTTCCTAACACGCAATTCTTATCGATCGTTCCTTGTGGAGCGTTAAGCATCAACAAACG
GCTAAGGGCATCCAT
TCAGGGTGCAAGCTGTCTGACCCTTTCCCGATATTCTCCCGGAGTACAACCAAACTCGCG
GACAAACGCCTTGTGAAAAGATGATTCACTGGCATAGCCTACTGACTCAGCGATCACCAC
AACAGGGAGCATTTCCCGGGAAAACATCTGGGCCGCTATTTGTAGACGCAACTTTGTTAA
TACAGCCAGCGGCGTGGTTCCGGAAACATCACGGAAAAGCTGGGCAAAACTTGCCCGAGA
CATGTGGGCGATGCTGGCCAGCGATTCGACGGTCCAGGCGTGTCCTGGCATTTCCAGCAT
TTGCTGTATTACCGCACCAAGACGTGGATGCAGAAGCAAACTGAGAATGTTTTTCTCTGT
ATTAACCTGTGCAATCCACTCACGCACCGCGAGGGTAAAGAATGTAGCGCAGATCTGGCT
ACACAGTGCATCCACTCCCGGCATCGCCGATCTGGATTCCTGTTGTAAAAACGGGATCGC
CTCCCTCAGCCAGTTATATTCCACGCTGTGGTTAACTGGTGCTAAAAACAGCGTTTCCGG
CAAAGACGTTAAAAAATAACGCGCCGAATGTTGCAGCCGAAGAGTGCCACAGACAATACA
GGTCGATTCATTATCGACATGACTCAGGCGATGAGCTGAATTTTGTGGTAGCAGGACCAC
ATTTCCCGGGCGTAATGTAAAAATCTCTCCCGTCGGCATTTCCAGCTTCGCCGCTCCTTG
CGTTAACGCATGCCAACGAATAACCGATAATTCCCCGGCACCATGTGGAAGCTGCCAGTC
ACTTCCTAACACGCAATTCTTATCGATCGTTCCTTGTGGAGCGTTAAGCATCAACAAACG
GCTAAGGGCATCCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT183 | Pseudomonas aeruginosa PAO1 |
34.146 |
28.873 |
0.099 |