TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | higA (AT6124) | Predicted domain | smart00530 (HTH_XRE) |
| Locus tag | orf3318 | Length | 131 a.a. |
| Coordinates | 3515722..3516117 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf3312 | 3511910..3512842 | - | 933 | ORF3312 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3313 | 3513104..3515608 | + | 2505 | ORF3313 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3314 | 3515722..3516117 | - | 396 | ORF3314 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf3315 | 3516201..3516995 | + | 795 | ORF3315 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3316 | 3517199..3517678 | + | 480 | ORF3316 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3317 | 3517715..3519367 | - | 1653 | ORF3317 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3318 | 3519585..3520805 | + | 1221 | ORF3318 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 15192.55 Da Isoelectric Point: 8.4414
>ORF3314 Orphan_TA_79 Antitoxin
MIQYVLASLFTGKQQLKTMKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVS
ALINNNRKLTTEMAFRLAKVFDTTVDFRLNLQAAVDLWEVENNMRTQEELGRIETVAEYL
ARREERAKKVA
MIQYVLASLFTGKQQLKTMKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVS
ALINNNRKLTTEMAFRLAKVFDTTVDFRLNLQAAVDLWEVENNMRTQEELGRIETVAEYL
ARREERAKKVA
Download Length: 396 bp
>ORF3314 Orphan_TA_79 Antitoxin
TTACGCGACCTTTTTTGCACGCTCTTCACGGCGTGCCAAATATTCAGCCACTGTTTCAAT
CCGTCCCAATTCTTCCTGGGTGCGCATGTTGTTTTCAACTTCCCAAAGATCAACTGCCGC
CTGGAGGTTTAGCCTAAAATCGACTGTGGTATCAAAAACTTTCGCCAGACGGAATGCCAT
CTCAGTGGTGAGTTTACGATTGTTATTGATCAGTGCACTGACGCTATTACGATGAACATG
CAGCAACTCTGCTAACTCATTGATTTTCAAATCGAGCGGTTCCAGATATTCATAGAGAAG
AATATCTCCGGGTGTCGTCGGTTTTCTTGTTGCCTGTTTCATGGTTTTTAACTGTTGCTT
CCCTGTGAATAGCGATGCAAGAACATACTGAATCAT
TTACGCGACCTTTTTTGCACGCTCTTCACGGCGTGCCAAATATTCAGCCACTGTTTCAAT
CCGTCCCAATTCTTCCTGGGTGCGCATGTTGTTTTCAACTTCCCAAAGATCAACTGCCGC
CTGGAGGTTTAGCCTAAAATCGACTGTGGTATCAAAAACTTTCGCCAGACGGAATGCCAT
CTCAGTGGTGAGTTTACGATTGTTATTGATCAGTGCACTGACGCTATTACGATGAACATG
CAGCAACTCTGCTAACTCATTGATTTTCAAATCGAGCGGTTCCAGATATTCATAGAGAAG
AATATCTCCGGGTGTCGTCGGTTTTCTTGTTGCCTGTTTCATGGTTTTTAACTGTTGCTT
CCCTGTGAATAGCGATGCAAGAACATACTGAATCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT6124 | Haemophilus influenzae 86-028NP |
55.435 |
85.981 |
0.389 |
| AT171 | Vibrio cholerae O1 biovar El Tor str. N16961 |
45.055 |
86.667 |
0.313 |
| AT10161 | Pseudomonas aeruginosa PA14 strain MA3 isolate DTU_MIE |
36.986 |
72.277 |
0.206 |
| AT10032 | Pseudomonas aeruginosa PAO1 |
35.616 |
72.277 |
0.198 |
| AT6083 | Pseudomonas putida KT2440 |
35.616 |
73.737 |
0.198 |
| AT6146 | Proteus vulgaris |
29.268 |
78.846 |
0.183 |
| AT10133 | Acetobacter pasteurianus strain Ab3 |
27.397 |
20.166 |
0.153 |
| AT6037 | Enterococcus faecium |
30.233 |
25.595 |
0.099 |
| AT6280 | Streptococcus suis 05ZYH33 |
30.233 |
25.595 |
0.099 |