TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Toxin (Protein)
| Predicted family | PfiT (T10100) | Predicted domain | - |
| Locus tag | orf2427 | Length | 146 a.a. |
| Coordinates | 2567351..2567791 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf2417 | 2564014..2564631 | - | 618 | ORF2417 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2418 | 2564628..2565071 | - | 444 | ORF2418 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2419 | 2565083..2566420 | - | 1338 | ORF2419 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2420 | 2566420..2567364 | - | 945 | ORF2420 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2421 | 2567351..2567791 | - | 441 | ORF2421 | Predicted ORF by PRODIGAL Version 1.20 | Toxin |
| orf2422 | 2567788..2568228 | - | 441 | ORF2422 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2423 | 2568228..2568698 | - | 471 | ORF2423 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2424 | 2568756..2569784 | - | 1029 | ORF2424 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2425 | 2569799..2570416 | - | 618 | ORF2425 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2426 | 2570409..2571731 | - | 1323 | ORF2426 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2427 | 2571712..2572545 | - | 834 | ORF2427 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Toxin
No domain identified.
Sequences
Orphan Toxin
Download Length: Molecular weight: 16601.71 Da Isoelectric Point: 4.5130
>ORF2421 Orphan_TA_54 Toxin
MKLCFGVIDQPYDYGDEPGKTTFDVACDLEERYEIFTHFWEMHKDEIIQEAGTELAYQLV
NHFKYKAPLPGEHFLEGTGKIFHIFLETEEMAGMTINGNPVPTQAALLGVNSRLKDKYTG
ERRPSFIDGGLFKGSFIAWIDNNAES
MKLCFGVIDQPYDYGDEPGKTTFDVACDLEERYEIFTHFWEMHKDEIIQEAGTELAYQLV
NHFKYKAPLPGEHFLEGTGKIFHIFLETEEMAGMTINGNPVPTQAALLGVNSRLKDKYTG
ERRPSFIDGGLFKGSFIAWIDNNAES
Download Length: 441 bp
>ORF2421 Orphan_TA_54 Toxin
TCAAGACTCGGCATTATTATCTATCCACGCTATAAAGCTGCCCTTAAACAGGCCGCCGTC
TATGAATGACGGACGCCGCTCTCCGGTATATTTATCCTTAAGCCTGGAGTTAACGCCCAG
TAGCGCGGCCTGAGTTGGCACAGGGTTTCCGTTAATCGTCATCCCGGCCATTTCTTCAGT
TTCAAGAAAAATATGGAAAATCTTCCCGGTCCCTTCCAGAAAATGCTCGCCAGGTAGCGG
AGCCTTATACTTGAAGTGATTGACCAACTGGTATGCCAGTTCAGTACCTGCCTCCTGGAT
AATCTCGTCCTTATGCATTTCCCAGAAGTGCGTAAAAATTTCGTATCGCTCCTCGAGGTC
ACAGGCTACGTCAAACGTGGTTTTTCCCGGCTCGTCGCCGTAGTCATACGGCTGGTCGAT
AACCCCAAAACAAAGTTTCAT
TCAAGACTCGGCATTATTATCTATCCACGCTATAAAGCTGCCCTTAAACAGGCCGCCGTC
TATGAATGACGGACGCCGCTCTCCGGTATATTTATCCTTAAGCCTGGAGTTAACGCCCAG
TAGCGCGGCCTGAGTTGGCACAGGGTTTCCGTTAATCGTCATCCCGGCCATTTCTTCAGT
TTCAAGAAAAATATGGAAAATCTTCCCGGTCCCTTCCAGAAAATGCTCGCCAGGTAGCGG
AGCCTTATACTTGAAGTGATTGACCAACTGGTATGCCAGTTCAGTACCTGCCTCCTGGAT
AATCTCGTCCTTATGCATTTCCCAGAAGTGCGTAAAAATTTCGTATCGCTCCTCGAGGTC
ACAGGCTACGTCAAACGTGGTTTTTCCCGGCTCGTCGCCGTAGTCATACGGCTGGTCGAT
AACCCCAAAACAAAGTTTCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T10100 | Pseudomonas aeruginosa PAO1 |
32.692 |
45.217 |
0.116 |