TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | I | ||
Orphan Toxin (Protein)
| Predicted family | CD2517.1 (T10171) | Predicted domain | smart00422 (HTH_MERR) |
| Locus tag | orf1606 | Length | 243 a.a. |
| Coordinates | 1712651..1713382 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf1597 | 1708767..1709684 | + | 918 | ORF1597 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1598 | 1709691..1710848 | + | 1158 | ORF1598 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1599 | 1710841..1711767 | + | 927 | ORF1599 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1600 | 1711772..1712503 | + | 732 | ORF1600 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1601 | 1712484..1712591 | - | 108 | ORF1601 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1602 | 1712651..1713382 | - | 732 | ORF1602 | Predicted ORF by PRODIGAL Version 1.20 | Toxin |
| orf1603 | 1713604..1715289 | + | 1686 | ORF1603 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1604 | 1715286..1716005 | + | 720 | ORF1604 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1605 | 1716052..1716522 | + | 471 | ORF1605 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1606 | 1716562..1717023 | - | 462 | ORF1606 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Toxin
No domain identified.
Sequences
Orphan Toxin
Download Length: Molecular weight: 28046.16 Da Isoelectric Point: 8.8296
>ORF1602 Orphan_TA_31 Toxin
MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNG
VQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRTWIKERGQDYPAQTLTTHL
FIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARKKQGKDALVVGWNIQDTTRLWL
EGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGENRTSAQQQQLTSWQEQGHDIFP
LGI
MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNG
VQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRTWIKERGQDYPAQTLTTHL
FIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARKKQGKDALVVGWNIQDTTRLWL
EGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGENRTSAQQQQLTSWQEQGHDIFP
LGI
Download Length: 732 bp
>ORF1602 Orphan_TA_31 Toxin
TTAAATGCCGAGTGGGAAAATATCATGGCCTTGTTCTTGCCAACTGGTGAGTTGCTGCTG
TTGGGCGGAGGTTCGATTTTCACCGCACCACACCAGCAATGTACGGCCTTCGAATAGTTC
AGGGCGTAGTTGATTGAGCGAGTGGGCGAGGACATCAATGCGCCATCCTTGTTGACTGGC
AATCCAGCCCTCCAGCCACAGACGGGTGGTATCCTGAATATTCCAGCCAACCACCAGCGC
ATCTTTACCCTGTTTTTTACGTGCCGAAGCCAGACAAATGGCGATGTAGTTGATCAGTAC
GCCGTCGAGGATCGCCAGCAGCGCCTGGAGAGTCGGTTGTTGGCACTGAAGCCGTCGGCG
CAGAGGAATAAACAGATGTGTGGTGAGTGTCTGGGCGGGGTAATCCTGACCGCGCTCTTT
GATCCACGTTCGCAGGCTATGCAGATTGCCGCTTTGCAGGTAGGTCAGTAATGTTTCTTG
CTGATCGCGCCAGCCGTTCTGCACATCAACATTTTCATTACTGAGCAGCATTTTAACTTT
GCTGACCTGCACGCCGTTGTCGATCCAGCGTTTGATCTCGCGGATACGGTCAATATCGGC
ATCGTTGAACAGTCGATGACCGCCGTCTGTCCGTTGCGGTTTCAGCAACCCGTAACGCCT
CTGCCACGCGCGTAACGTGACAGGGTTAATATCACAAAGCAACGCCACTTCACCAATTGT
GTAAAGCGCCAT
TTAAATGCCGAGTGGGAAAATATCATGGCCTTGTTCTTGCCAACTGGTGAGTTGCTGCTG
TTGGGCGGAGGTTCGATTTTCACCGCACCACACCAGCAATGTACGGCCTTCGAATAGTTC
AGGGCGTAGTTGATTGAGCGAGTGGGCGAGGACATCAATGCGCCATCCTTGTTGACTGGC
AATCCAGCCCTCCAGCCACAGACGGGTGGTATCCTGAATATTCCAGCCAACCACCAGCGC
ATCTTTACCCTGTTTTTTACGTGCCGAAGCCAGACAAATGGCGATGTAGTTGATCAGTAC
GCCGTCGAGGATCGCCAGCAGCGCCTGGAGAGTCGGTTGTTGGCACTGAAGCCGTCGGCG
CAGAGGAATAAACAGATGTGTGGTGAGTGTCTGGGCGGGGTAATCCTGACCGCGCTCTTT
GATCCACGTTCGCAGGCTATGCAGATTGCCGCTTTGCAGGTAGGTCAGTAATGTTTCTTG
CTGATCGCGCCAGCCGTTCTGCACATCAACATTTTCATTACTGAGCAGCATTTTAACTTT
GCTGACCTGCACGCCGTTGTCGATCCAGCGTTTGATCTCGCGGATACGGTCAATATCGGC
ATCGTTGAACAGTCGATGACCGCCGTCTGTCCGTTGCGGTTTCAGCAACCCGTAACGCCT
CTGCCACGCGCGTAACGTGACAGGGTTAATATCACAAAGCAACGCCACTTCACCAATTGT
GTAAAGCGCCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T10171 | Clostridium difficile 630 |
43.182 |
84.615 |
0.078 |