TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | mazE (AT10073) | Predicted domain | - |
| Locus tag | orf1232 | Length | 173 a.a. |
| Coordinates | 1314640..1315161 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf1224 | 1309987..1311048 | + | 1062 | ORF1224 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1225 | 1311086..1311934 | - | 849 | ORF1225 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1226 | 1311956..1313968 | - | 2013 | ORF1226 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1227 | 1313998..1314411 | - | 414 | ORF1227 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1228 | 1314640..1315161 | - | 522 | ORF1228 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf1229 | 1315158..1315697 | - | 540 | ORF1229 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1230 | 1315707..1317422 | - | 1716 | ORF1230 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1231 | 1317412..1318992 | - | 1581 | ORF1231 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1232 | 1318997..1319647 | - | 651 | ORF1232 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 18845.82 Da Isoelectric Point: 9.0742
>ORF1228 Orphan_TA_22 Antitoxin
MSPVLTQYVSQPITLDEQTQKMKQHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD
AERFGIKVISSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGAGGGFSTI
STASGAAATPLSPLMFGSPAARQHRPPPFTVSPWRSVCCNRRFTRWIIAIPPG
MSPVLTQYVSQPITLDEQTQKMKQHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD
AERFGIKVISSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGAGGGFSTI
STASGAAATPLSPLMFGSPAARQHRPPPFTVSPWRSVCCNRRFTRWIIAIPPG
Download Length: 522 bp
>ORF1228 Orphan_TA_22 Antitoxin
TCACCCCGGTGGGATCGCGATAATCCACCGCGTGAATCTTCTGTTGCAGCAAACCGAGCG
CCACGGCGAAACCGTGAATGGTGGCGGCCGGTGTTGGCGGGCAGCCGGGGATCCAAACAT
CAATGGGGACAATGGTGTCGCTGCCGCCCCAGACGCTGTAGAGATCGTGGAAAATCCGCC
GCCGGCACCGCACGCGCCGTAGGAAACACAGATTTTATGATCGGGGGCAGACTCATACGC
CCGAAGTGCAGGCATACGCATCGCCCGGGTGACTGCGCCTGTAAATAACAAAATATCGGC
GTGACGCGGTGATGAAATAACCTTAATGCCAAAACGTTCTGCGTCGAATACTGGTGTGAT
GGCGGCAAAAATTTCGATTTCACAGGCGTTGCAGCCGCCGCAATCGACGCGATAAACGTA
AGCCGAGCGACGGATATCCTGTAGCAAATGCTGCTTCATCTTTTGCGTTTGCTCGTCCAG
CGTGATGGGCTGGCTGACATATTGCGTAAGCACTGGACTCAT
TCACCCCGGTGGGATCGCGATAATCCACCGCGTGAATCTTCTGTTGCAGCAAACCGAGCG
CCACGGCGAAACCGTGAATGGTGGCGGCCGGTGTTGGCGGGCAGCCGGGGATCCAAACAT
CAATGGGGACAATGGTGTCGCTGCCGCCCCAGACGCTGTAGAGATCGTGGAAAATCCGCC
GCCGGCACCGCACGCGCCGTAGGAAACACAGATTTTATGATCGGGGGCAGACTCATACGC
CCGAAGTGCAGGCATACGCATCGCCCGGGTGACTGCGCCTGTAAATAACAAAATATCGGC
GTGACGCGGTGATGAAATAACCTTAATGCCAAAACGTTCTGCGTCGAATACTGGTGTGAT
GGCGGCAAAAATTTCGATTTCACAGGCGTTGCAGCCGCCGCAATCGACGCGATAAACGTA
AGCCGAGCGACGGATATCCTGTAGCAAATGCTGCTTCATCTTTTGCGTTTGCTCGTCCAG
CGTGATGGGCTGGCTGACATATTGCGTAAGCACTGGACTCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10073 | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 strain R1 |
30.952 |
56.757 |
0.075 |