TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | phd (AT10093) | Predicted domain | PRK10870 (MprA) |
| Locus tag | orf1074 | Length | 176 a.a. |
| Coordinates | 1140067..1140597 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf1064 | 1135095..1136303 | + | 1209 | ORF1064 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1065 | 1136278..1136484 | + | 207 | ORF1065 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1066 | 1136634..1137149 | + | 516 | ORF1066 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1067 | 1137213..1138751 | - | 1539 | ORF1067 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1068 | 1138768..1139940 | - | 1173 | ORF1068 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1069 | 1140067..1140597 | - | 531 | ORF1069 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf1070 | 1140688..1141023 | - | 336 | ORF1070 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1071 | 1141013..1141750 | - | 738 | ORF1071 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1072 | 1141874..1143058 | - | 1185 | ORF1072 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1073 | 1143350..1144342 | - | 993 | ORF1073 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1074 | 1144400..1145464 | - | 1065 | ORF1074 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 20563.45 Da Isoelectric Point: 6.1482
>ORF1069 Orphan_TA_21 Antitoxin
MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENRNKMLKAQGINETLFMA
LITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIERRESDNDRRCLHLQLTEK
GHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLSRLDQMEQDGVVLEAMS
MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENRNKMLKAQGINETLFMA
LITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIERRESDNDRRCLHLQLTEK
GHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLSRLDQMEQDGVVLEAMS
Download Length: 531 bp
>ORF1069 Orphan_TA_21 Antitoxin
TTAGCTCATCGCTTCGAGAACCACACCGTCTTGTTCCATCTGGTCGAGACGGGAGAGCAA
TTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTG
ATGCAGGCAGTTATGCTGCGGTGGTAAAACCTCGCGCAAAAACTCGTGACCTTTTTCCGT
TAATTGCAGATGCAGGCAGCGGCGATCGTTATCGCTTTCACGACGTTCGATCCAACCGCG
TTTTTCCAGTTCATCGGCAATACGCGTCGCGTTGGTACGGGATGATCCAAGAGCACAACT
TAATTCAGAAGGCTGAATACTGTGGTTTTCCTGAGACTCCAGCGTAATCAACGCCATAAA
CAACGTCTCGTTAATCCCCTGAGCCTTCAGCATTTTATTGCGGTTCTCCAGCAGCTTGCT
TTGCATGTGCATGCAAAGACGAGTCAGAAGGATCTCCTGATAAGGAAAATCTTCGTGGCG
GCTGGCGCGAAATTTTAGCATTTGTTCAATGGGCGTAAACGAACTATCCAT
TTAGCTCATCGCTTCGAGAACCACACCGTCTTGTTCCATCTGGTCGAGACGGGAGAGCAA
TTTGCGGGTGATTTGCTCGAGCTGATCTTTTTCTGTTGTGCTGAGCGCGGACCAGAGTTG
ATGCAGGCAGTTATGCTGCGGTGGTAAAACCTCGCGCAAAAACTCGTGACCTTTTTCCGT
TAATTGCAGATGCAGGCAGCGGCGATCGTTATCGCTTTCACGACGTTCGATCCAACCGCG
TTTTTCCAGTTCATCGGCAATACGCGTCGCGTTGGTACGGGATGATCCAAGAGCACAACT
TAATTCAGAAGGCTGAATACTGTGGTTTTCCTGAGACTCCAGCGTAATCAACGCCATAAA
CAACGTCTCGTTAATCCCCTGAGCCTTCAGCATTTTATTGCGGTTCTCCAGCAGCTTGCT
TTGCATGTGCATGCAAAGACGAGTCAGAAGGATCTCCTGATAAGGAAAATCTTCGTGGCG
GCTGGCGCGAAATTTTAGCATTTGTTCAATGGGCGTAAACGAACTATCCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10093 | Burkholderia pseudomallei K96243 |
38 |
17.606 |
0.108 |