TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | NpoA (AT10134) | Predicted domain | - |
| Locus tag | orf980 | Length | 261 a.a. |
| Coordinates | 1046116..1046901 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf974 | 1043015..1044493 | - | 1479 | ORF974 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf975 | 1044520..1045797 | - | 1278 | ORF975 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf976 | 1046116..1046901 | + | 786 | ORF976 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf977 | 1046971..1048425 | + | 1455 | ORF977 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf978 | 1048447..1049856 | + | 1410 | ORF978 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf979 | 1049834..1050613 | + | 780 | ORF979 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf980 | 1050610..1051470 | + | 861 | ORF980 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 28100.10 Da Isoelectric Point: 4.8742
>ORF976 Orphan_TA_18 Antitoxin
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEM
IEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDP
MIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAY
CDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLA
SPASNYVNGHLLVVDGGYLVR
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEM
IEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDP
MIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAY
CDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLA
SPASNYVNGHLLVVDGGYLVR
Download Length: 786 bp
>ORF976 Orphan_TA_18 Antitoxin
ATGTCAATCGAATCTCTCAATGCGTTCTCAATGGATTTTTTCTCACTGAAAGGTAAAACC
GCAATTGTTACCGGTGGGAATAGCGGTTTAGGCCAGGCATTTGCCATGGCGTTGGCCAAA
GCTGGCGCAAATATCTTTATTCCTAGTTTCGTCAAAGATAACGGCGAAACAAAGGAAATG
ATTGAAAAACAGGGTGTTGAGGTGGACTTCATGCAGGTGGATATCACCGCAGAAGGCGCG
CCGCAGAAGATTATCGCTGCTTGCTGTGAGCGTTTCGGTACAGTTGATATTCTGGTAAAC
AATGCCGGTATTTGTAAGCTGAATAAGGTGCTGGACTTCGGTCGTGCCGACTGGGATCCG
ATGATTGATGTGAACCTGACCGCCGCATTCGAGTTAAGCTATGAAGCTGCAAAAATTATG
ATCCCGCAGAAAAGCGGCAAAATTATTAATATCTGTTCATTGTTCTCTTACTTAGGTGGA
CAATGGTCACCTGCATATTCTGCCACTAAACATGCTCTTGCCGGGTTCACCAAAGCTTAT
TGTGATGAGCTAGGTCAATATAATATTCAGGTAAATGGTATCGCCCCTGGCTATTATGCA
ACAGATATTACGCTGGCGACACGCAGTAATCCAGAAACCAATCAGCGCGTTCTTGATCAT
ATTCCGGCAAACCGTTGGGGCGATACTCAGGATTTAATGGGCGCAGCTGTATTCCTCGCA
AGTCCGGCTTCAAATTATGTCAATGGGCATTTATTAGTGGTCGATGGTGGTTATTTAGTG
CGCTAA
ATGTCAATCGAATCTCTCAATGCGTTCTCAATGGATTTTTTCTCACTGAAAGGTAAAACC
GCAATTGTTACCGGTGGGAATAGCGGTTTAGGCCAGGCATTTGCCATGGCGTTGGCCAAA
GCTGGCGCAAATATCTTTATTCCTAGTTTCGTCAAAGATAACGGCGAAACAAAGGAAATG
ATTGAAAAACAGGGTGTTGAGGTGGACTTCATGCAGGTGGATATCACCGCAGAAGGCGCG
CCGCAGAAGATTATCGCTGCTTGCTGTGAGCGTTTCGGTACAGTTGATATTCTGGTAAAC
AATGCCGGTATTTGTAAGCTGAATAAGGTGCTGGACTTCGGTCGTGCCGACTGGGATCCG
ATGATTGATGTGAACCTGACCGCCGCATTCGAGTTAAGCTATGAAGCTGCAAAAATTATG
ATCCCGCAGAAAAGCGGCAAAATTATTAATATCTGTTCATTGTTCTCTTACTTAGGTGGA
CAATGGTCACCTGCATATTCTGCCACTAAACATGCTCTTGCCGGGTTCACCAAAGCTTAT
TGTGATGAGCTAGGTCAATATAATATTCAGGTAAATGGTATCGCCCCTGGCTATTATGCA
ACAGATATTACGCTGGCGACACGCAGTAATCCAGAAACCAATCAGCGCGTTCTTGATCAT
ATTCCGGCAAACCGTTGGGGCGATACTCAGGATTTAATGGGCGCAGCTGTATTCCTCGCA
AGTCCGGCTTCAAATTATGTCAATGGGCATTTATTAGTGGTCGATGGTGGTTATTTAGTG
CGCTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10134 | Acetobacter pasteurianus strain Ab3 |
33.061 |
86.268 |
0.31 |