TAfinder detailed results
Overview
| Job ID | 9mizKMmBqU | ||
| Sequence name | Escherichia coli strain DH5alpha chromosome, complete genome. | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | - (AT183) | Predicted domain | - |
| Locus tag | C1467_RS19350 | Length | 285 a.a. |
| Coordinates | 3720532..3721389 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1467_RS19320 | 3715899..3716753 | - | 855 | WP_000339593.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| C1467_RS19325 | 3716979..3718304 | + | 1326 | WP_001046325.1 | reactive chlorine resistance oxidoreductase RclA | - |
| C1467_RS19330 | 3718413..3718649 | + | 237 | WP_000474077.1 | reactive chlorine resistance periplasmic protein RclB | - |
| C1467_RS19335 | 3718661..3719254 | + | 594 | WP_001299021.1 | reactive chlorine species resistance protein RclC | - |
| C1467_RS19340 | 3719414..3720283 | - | 870 | WP_001299025.1 | aldo/keto reductase | - |
| C1467_RS19345 | 3720532..3721389 | + | 858 | WP_000621018.1 | helix-turn-helix domain-containing protein | Antitoxin |
| C1467_RS19350 | 3721510..3725763 | - | 4254 | WP_000092606.1 | inverse autotransporter adhesin FdeC | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 33907.79 Da Isoelectric Point: 7.6404
>WP_000621018.1 Orphan_TA_88 Antitoxin
MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC
RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI
RQQQKTECRLVNFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMNNFKTDIYFVS
TFEPSTKSVDLLTVETFAGTVCKQTDSEMPKEWTINRGLYASFRYEGEWEHYPEWARNLY
LMELPARGLARVNGSDIERFYYNEDFVEKDSNDVVCEIFIPVRPV*
MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC
RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI
RQQQKTECRLVNFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMNNFKTDIYFVS
TFEPSTKSVDLLTVETFAGTVCKQTDSEMPKEWTINRGLYASFRYEGEWEHYPEWARNLY
LMELPARGLARVNGSDIERFYYNEDFVEKDSNDVVCEIFIPVRPV*
Download Length: 858 bp
>WP_000621018.1 Orphan_TA_88 Antitoxin
ATGATCAGGCAGAAGATTCTACAGCAGCTCCTGGAGTGGATTGAGTGCAATCTTGAGCAC
CCTATTTCAATCGAAGATATCGCACAGAAATCTGGCTACAGCAGACGCAACATCCAGCTT
CTGTTCCGAAATTTCATGCATGTGCCTTTGGGAGAATACATTCGCAAACGAAGGCTTTGC
CGTGCCGCTATTCTTGTCCGGCTCACCGCGAAATCTATGCTTGATATTGCACTCTCTTTG
CATTTTGATTCACAGCAGTCATTCAGCCGCGAATTTAAAAAGTTATTCGGCTGCTCTCCC
CGTGAATACCGCCACCGTGATTATTGGGATCTCGCAAATATCTTCCCTTCTTTTTTAATA
CGTCAACAGCAAAAGACGGAGTGTAGATTAGTCAATTTTCCTGAGACACCTATTTTTGGC
AACTCATTTAAATATGACATTGAAGTGTCGAATAAATCACCGGATGAAGAAGTCAAACTG
CGACGTCATCATTTAGCCAGATGTATGAATAATTTTAAGACGGATATCTATTTCGTTTCC
ACGTTTGAACCGTCAACAAAATCGGTCGATTTGCTCACGGTTGAAACTTTTGCCGGTACG
GTATGCAAACAAACCGATTCAGAGATGCCGAAAGAGTGGACAATTAACCGAGGACTGTAT
GCCTCTTTCCGCTATGAAGGTGAGTGGGAGCACTACCCTGAATGGGCGCGAAACCTCTAT
CTGATGGAATTACCCGCCAGGGGGTTAGCCAGAGTGAACGGCAGTGATATTGAGCGGTTT
TATTACAATGAAGATTTCGTAGAAAAGGATAGCAATGATGTTGTTTGCGAAATTTTTATC
CCCGTTCGTCCGGTTTAG
ATGATCAGGCAGAAGATTCTACAGCAGCTCCTGGAGTGGATTGAGTGCAATCTTGAGCAC
CCTATTTCAATCGAAGATATCGCACAGAAATCTGGCTACAGCAGACGCAACATCCAGCTT
CTGTTCCGAAATTTCATGCATGTGCCTTTGGGAGAATACATTCGCAAACGAAGGCTTTGC
CGTGCCGCTATTCTTGTCCGGCTCACCGCGAAATCTATGCTTGATATTGCACTCTCTTTG
CATTTTGATTCACAGCAGTCATTCAGCCGCGAATTTAAAAAGTTATTCGGCTGCTCTCCC
CGTGAATACCGCCACCGTGATTATTGGGATCTCGCAAATATCTTCCCTTCTTTTTTAATA
CGTCAACAGCAAAAGACGGAGTGTAGATTAGTCAATTTTCCTGAGACACCTATTTTTGGC
AACTCATTTAAATATGACATTGAAGTGTCGAATAAATCACCGGATGAAGAAGTCAAACTG
CGACGTCATCATTTAGCCAGATGTATGAATAATTTTAAGACGGATATCTATTTCGTTTCC
ACGTTTGAACCGTCAACAAAATCGGTCGATTTGCTCACGGTTGAAACTTTTGCCGGTACG
GTATGCAAACAAACCGATTCAGAGATGCCGAAAGAGTGGACAATTAACCGAGGACTGTAT
GCCTCTTTCCGCTATGAAGGTGAGTGGGAGCACTACCCTGAATGGGCGCGAAACCTCTAT
CTGATGGAATTACCCGCCAGGGGGTTAGCCAGAGTGAACGGCAGTGATATTGAGCGGTTT
TATTACAATGAAGATTTCGTAGAAAAGGATAGCAATGATGTTGTTTGCGAAATTTTTATC
CCCGTTCGTCCGGTTTAG
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT183 | Pseudomonas aeruginosa PAO1 |
32.258 |
32.746 |
0.105 |