TAfinder detailed results
Overview
| Job ID | 9mizKMmBqU | ||
| Sequence name | Escherichia coli strain DH5alpha chromosome, complete genome. | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | - (AT183) | Predicted domain | - |
| Locus tag | C1467_RS19345 | Length | 284 a.a. |
| Coordinates | 3715899..3716753 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1467_RS19290 | 3711626..3712294 | + | 669 | WP_001209089.1 | protein YkgH | - |
| C1467_RS19305 | 3712537..3713232 | - | 696 | WP_000370401.1 | lactate utilization protein C | - |
| C1467_RS19310 | 3713225..3714652 | - | 1428 | WP_000023907.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| C1467_RS19315 | 3714663..3715382 | - | 720 | WP_001102119.1 | (Fe-S)-binding protein | - |
| C1467_RS19320 | 3715899..3716753 | - | 855 | WP_000339593.1 | reactive chlorine-specific transcriptional regulator RclR | Antitoxin |
| C1467_RS19325 | 3716979..3718304 | + | 1326 | WP_001046325.1 | reactive chlorine resistance oxidoreductase RclA | - |
| C1467_RS19330 | 3718413..3718649 | + | 237 | WP_000474077.1 | reactive chlorine resistance periplasmic protein RclB | - |
| C1467_RS19335 | 3718661..3719254 | + | 594 | WP_001299021.1 | reactive chlorine species resistance protein RclC | - |
| C1467_RS19340 | 3719414..3720283 | - | 870 | WP_001299025.1 | aldo/keto reductase | - |
| C1467_RS19345 | 3720532..3721389 | + | 858 | WP_000621018.1 | helix-turn-helix domain-containing protein | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 31504.44 Da Isoelectric Point: 7.2124
>WP_000339593.1 Orphan_TA_87 Antitoxin
MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHALTQGAAKLEMPTGEIFT
LRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSARYFLTSLPETLFLAPVNHSVEY
NWLREAIPFLQQESRSAMPGVDALCSQICATFFTLAVREWIAQVNTEKNILSLLLHPRLG
AVIQQMLEMPGHAWTVESLASIAHMSRASFAQLFRDVSGTTPLAVLTKLRLQIAAQMFSR
EMLPVVVIAESVGYASESSFHKAFVREFGCTPGEYRERVRQLAP*
MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHALTQGAAKLEMPTGEIFT
LRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSARYFLTSLPETLFLAPVNHSVEY
NWLREAIPFLQQESRSAMPGVDALCSQICATFFTLAVREWIAQVNTEKNILSLLLHPRLG
AVIQQMLEMPGHAWTVESLASIAHMSRASFAQLFRDVSGTTPLAVLTKLRLQIAAQMFSR
EMLPVVVIAESVGYASESSFHKAFVREFGCTPGEYRERVRQLAP*
Download Length: 855 bp
>WP_000339593.1 Orphan_TA_87 Antitoxin
TCAGGGTGCAAGCTGTCTGACCCTTTCCCGATATTCTCCCGGAGTACAACCAAACTCGCG
GACAAACGCCTTGTGAAAAGATGATTCACTGGCATAGCCTACTGACTCAGCGATCACCAC
AACAGGGAGCATTTCCCGGGAAAACATCTGGGCCGCTATTTGTAGACGCAACTTTGTTAA
TACAGCCAGCGGCGTGGTTCCGGAAACATCACGGAAAAGCTGGGCAAAACTTGCCCGAGA
CATGTGGGCGATGCTGGCCAGCGATTCGACGGTCCAGGCGTGTCCTGGCATTTCCAGCAT
TTGCTGTATTACCGCACCAAGACGTGGATGCAGAAGCAAACTGAGAATGTTTTTCTCTGT
ATTAACCTGTGCAATCCACTCACGCACCGCGAGGGTAAAGAATGTAGCGCAGATCTGGCT
ACACAGTGCATCCACTCCCGGCATCGCCGATCTGGATTCCTGTTGTAAAAACGGGATCGC
CTCCCTCAGCCAGTTATATTCCACGCTGTGGTTAACTGGTGCTAAAAACAGCGTTTCCGG
CAAAGACGTTAAAAAATAACGCGCCGAATGTTGCAGCCGAAGAGTGCCACAGACAATACA
GGTCGATTCATTATCGACATGACTCAGGCGATGAGCTGAATTTTGTGGTAGCAGGACCAC
ATTTCCCGGGCGTAATGTAAAAATCTCTCCCGTCGGCATTTCCAGCTTCGCCGCTCCTTG
CGTTAACGCATGCCAACGAATAACCGATAATTCCCCGGCACCATGTGGAAGCTGCCAGTC
ACTTCCTAACACGCAATTCTTATCGATCGTTCCTTGTGGAGCGTTAAGCATCAACAAACG
GCTAAGGGCATCCAT
TCAGGGTGCAAGCTGTCTGACCCTTTCCCGATATTCTCCCGGAGTACAACCAAACTCGCG
GACAAACGCCTTGTGAAAAGATGATTCACTGGCATAGCCTACTGACTCAGCGATCACCAC
AACAGGGAGCATTTCCCGGGAAAACATCTGGGCCGCTATTTGTAGACGCAACTTTGTTAA
TACAGCCAGCGGCGTGGTTCCGGAAACATCACGGAAAAGCTGGGCAAAACTTGCCCGAGA
CATGTGGGCGATGCTGGCCAGCGATTCGACGGTCCAGGCGTGTCCTGGCATTTCCAGCAT
TTGCTGTATTACCGCACCAAGACGTGGATGCAGAAGCAAACTGAGAATGTTTTTCTCTGT
ATTAACCTGTGCAATCCACTCACGCACCGCGAGGGTAAAGAATGTAGCGCAGATCTGGCT
ACACAGTGCATCCACTCCCGGCATCGCCGATCTGGATTCCTGTTGTAAAAACGGGATCGC
CTCCCTCAGCCAGTTATATTCCACGCTGTGGTTAACTGGTGCTAAAAACAGCGTTTCCGG
CAAAGACGTTAAAAAATAACGCGCCGAATGTTGCAGCCGAAGAGTGCCACAGACAATACA
GGTCGATTCATTATCGACATGACTCAGGCGATGAGCTGAATTTTGTGGTAGCAGGACCAC
ATTTCCCGGGCGTAATGTAAAAATCTCTCCCGTCGGCATTTCCAGCTTCGCCGCTCCTTG
CGTTAACGCATGCCAACGAATAACCGATAATTCCCCGGCACCATGTGGAAGCTGCCAGTC
ACTTCCTAACACGCAATTCTTATCGATCGTTCCTTGTGGAGCGTTAAGCATCAACAAACG
GCTAAGGGCATCCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT183 | Pseudomonas aeruginosa PAO1 |
34.146 |
28.873 |
0.098 |